Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq8 165 2e-35
seq6 143 6e-29
seq2 105 2e-17
>seq8
Length=506948
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| || | |||||||||||| || ||||||||||| || || | ||| || || ||
Sbjct 221957 TCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACC 221898
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || |||||||| | ||||||||||| || |||| ||||||||
Sbjct 221897 GTCTTCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTT 221838
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || ||||| || ||||||||||| ||| || || ||||| ||
Sbjct 221837 GTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCGACTTCAAGAGTAAT 221778
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | |||||
Sbjct 221777 AGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221742
Score = 156 bits (172), Expect = 1e-32
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| || | |||||||||||| || ||||||||||| || || | | ||| || ||
Sbjct 222185 TCTTAATACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTGCC 222126
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | ||||||||| || |||| ||||||||
Sbjct 222125 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTT 222066
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || ||||| || ||||||||||| |||||| || ||||| ||
Sbjct 222065 GTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCAACTTCAAGAGTAAT 222006
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | |||||
Sbjct 222005 AGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221970
Score = 156 bits (172), Expect = 1e-32
Identities = 157/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||||||||| || ||||||||||| || || | ||| || || || ||||||| ||
Sbjct 222629 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTG 222570
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || ||||| | | ||||||||| || |||| ||||||||||| ||||||||
Sbjct 222569 CTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTT 222510
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| || || ||||||||| ||||| ||||| ||||| ||||| || ||
Sbjct 222509 GGACTTAACGTTGTCAATAGTGTCAGAGGACTCAACTTCGAGGGTGATAGTCTTACCGGT 222450
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| || || | |||||
Sbjct 222449 CAAAGTCTTGACGAAAATTTGCAT 222426
Score = 149 bits (164), Expect = 1e-30
Identities = 167/222 (75%), Gaps = 1/222 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| || | |||||||||||| || ||||||||||| || || | ||| || || ||
Sbjct 221729 TCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACC 221670
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || |||||||| | ||||||||||| || |||| ||||||||
Sbjct 221669 GTCTTCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTT 221610
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| |||||||| || ||||| || || |||||||| |||||| || | || ||
Sbjct 221609 ATCTTGGATCTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAAT 221550
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT-TTTAT 211119
||||| || || | ||||| || || | ||||| |||||
Sbjct 221549 GGTCTTACCGGTCAATGTCTTAACGAAGATTTGCATGTTTAT 221508
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| || | |||||||||||| || ||||||||||| || || | | ||| || ||
Sbjct 222413 TCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTGCC 222354
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||| | ||||| || ||||| || | | ||||||||| || |||| ||||||||
Sbjct 222353 GTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTT 222294
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || ||||| || || ||||||||| || || || ||||| ||
Sbjct 222293 GTCTTGGATCTTGGACTTAACGTTGTCAATAGTGTCAGAGGACTCGACTTCAAGAGTAAT 222234
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | ||||| || || | |||||
Sbjct 222233 AGTCTTACCAGTCAAGGTCTTGACGAAAATTTGCAT 222198
>seq6
Length=1682205
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| ||| | ||| | ||||| || || |||||||| || || | ||| || || ||
Sbjct 47331 TCTTAAGACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACC 47272
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| |||||| || |||||||| | | |||||||||||| |||| ||||||||
Sbjct 47271 GTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 47212
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|||||| ||||| || || || || |||||||| ||| || || || | || ||
Sbjct 47211 GTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAAT 47152
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||||||
Sbjct 47151 GGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 47113
>seq2
Length=3116340
Score = 105 bits (116), Expect = 2e-17
Identities = 237/356 (67%), Gaps = 0/356 (0%)
Strand=Plus/Plus
Query 178085 ATTCCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144
|| || ||||||||||||||| |||| || | ||| || |||||| ||||| ||
Sbjct 2774308 ATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCGTCCTTGTACAACATGAAAGGA 2774367
Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204
| || ||||| || ||| | | |||| | ||| | || ||||| ||||||
Sbjct 2774368 GTACCGGTCTCAGTCTGGGCCTCCAAAATGGCGTACCACAACTTTTGGGCCTTGACAGTG 2774427
Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAG 178264
||| | || | ||||| ||||||| || ||| | ||| |||||||| || ||
Sbjct 2774428 TTTCTTCCTCTACCTTCTCTCTCGTAACGTTCGTACAACTCTTCGAATTCGTCACCGTAT 2774487
Query 178265 ACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTC 178324
|| || | || ||||| || || || |||| ||| |||| | ||||| || |
Sbjct 2774488 ACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATCACCGTTTTGTTCG 2774547
Query 178325 ACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAATCTCTCTGGCTCTCATC 178384
|||| |||||||| | ||| | |||| | || ||| | ||||| ||||| |||
Sbjct 2774548 ACTCTCTTCATGAACAAGTCTGGAATCCACAAAGCTGGGAACAAATCTCTAGCTCTAATC 2774607
Query 178385 AGGTCATTTCCTCCGGGTTTTCTGGCATCAACAAAGTCAAAAATGTCCACATGCCA 178440
|| || || | |||||| ||||| ||||| |||||||| | |||||
Sbjct 2774608 TCTTCCTTACCGTGGTTCTTTCTGATATCAATGAAGTCGAAAATGTCTGCGTGCCA 2774663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151851483650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |