Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2 212 5e-50 >seq2 Length=3116340 Score = 212 bits (234), Expect = 5e-50 Identities = 578/875 (66%), Gaps = 14/875 (2%) Strand=Plus/Plus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| || |||| ||| |||||||| ||||| || || |||| || || || Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAGAGCTACAAG 4375 ||||| || || || || || || ||||||| | || || | | ||| | | Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTGCCCAA-AGCAATCAA 2726267 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 |||| ||| || || || || | || || | ||| | |||| ||| ||||| | ||| Sbjct 2726268 TAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAATAA 2726327 Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 || || | || | || || || ||||| || || | || ||||| || || || Sbjct 2726328 GGAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAATGAT 2726387 Query 4496 ATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAA 4555 | | | || || |||| | ||| |||| ||||| ||||| || || Sbjct 2726388 CTTCTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGAGAGAACAACAAACAGGCGAA 2726447 Query 4556 ATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCAT 4615 || || |||||||||||||| | |||| |||||| || || || || || ||||| Sbjct 2726448 GTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCTGGCAT 2726507 Query 4616 TAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTC 4675 |||||||||||| || | ||| || |||| || || || ||| || || || || || Sbjct 2726508 TAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGATACCCTC 2726567 Query 4676 TACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTA---ATCCA 4732 || || || || |||||||||| |||||| | ||||| || | | ||||| Sbjct 2726568 AACAGCAGCGAAAGCTACTAATCTCTCACCGAACAA---GGCTTCATCGTCAGAGATCCA 2726624 Query 4733 TTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA 4792 | | || ||||||| ||| || || | | || ||||| ||| || ||||| || || Sbjct 2726625 TCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGCGTTGAA-AA 2726683 Query 4793 TTTACT-TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAG 4851 | | ||| ||||| | || |||||||| |||| || || | |||| Sbjct 2726684 GGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTATGTCTCAG 2726743 Query 4852 AATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAA 4911 | || || ||||| || ||| || || ||||| || || | ||||||| | ||| | Sbjct 2726744 AGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGGA 2726803 Query 4912 CTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAA 4971 |||| | | || | || || ||||| ||||| || ||||| ||| ||| || || | Sbjct 2726804 CTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGCGAAGA 2726863 Query 4972 ACGCCAAAACATGAGATATAAAGTACTGTTCG-TCAGGCTTAAGTTTT--TTCCAGTGGG 5028 | ||||| | | | || || ||||| |||| || | | || || | ||||||| | Sbjct 2726864 AAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCAACTTGTGGTTCCAGTCAG 2726923 Query 5029 GCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGT 5088 ||| ||| | || || | |||||| | ||||| || || ||||| || || |||| Sbjct 2726924 TGGTATCCTTACTCAAGTCGATTTCTTCGGCGGTCCAGAAGGAGGCTTCAGCCTTCTTGT 2726983 Query 5089 ACATAGACCAAATATCAGGATAC-TGAATCGGAAG 5122 |||| ||| | ||| | ||| ||| | ||||| Sbjct 2726984 ACATTTGCCAGACTTCATGGTACTTGATTGGGAAG 2727018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049547953330