Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq2 185 1e-41
seq1 118 1e-21
>seq2
Length=3116340
Score = 185 bits (204), Expect = 1e-41
Identities = 578/885 (65%), Gaps = 20/885 (2%)
Strand=Plus/Plus
Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909
||||| || |||| || | |||||||| || ||||| || || | || || || ||
Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208
Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969
||||| || || ||||| || | || || | || || || || | ||||
Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTGCCCAAAGC---AATC 2726265
Query 47970 AGT---CTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA-T 48025
| | || || |||||||| || | ||| ||||| ||| |||||||||| |
Sbjct 2726266 AATAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAAT 2726325
Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT 48085
||| |||||| | ||| || || | || ||||| ||||| ||||||| || ||
Sbjct 2726326 AAGGA-AACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAAT 2726384
Query 48086 TATCGATGTTACCGTTTCCTCACT-TGGTGGATACAACAAATGTTTAAACATTAAACATG 48144
||| | | | | | || | |||| | ||| || |||| ||||| |
Sbjct 2726385 GATCT-TCTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGAGAGAACAACAAACAGG 2726443
Query 48145 CAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204
| || || || | |||||| ||||||| || |||||||| || || || | ||| |
Sbjct 2726444 CGAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCTG 2726503
Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264
|||||| || | || || | ||| || || | ||||| |||||| || || || |
Sbjct 2726504 GCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGATAC 2726563
Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCC 48321
| || || || || || || | |||||| ||| | |||||| | || ||||
Sbjct 2726564 CCTCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATCGTCAGAGATCC 2726623
Query 48322 ACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 48381
| | ||||| ||||||||||| | | ||| || || | || || || || || |
Sbjct 2726624 ATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGCGTTGAAAA 2726683
Query 48382 GAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTA--AAAGACTATACATTTC 48439
| |||| ||| || || ||||||||||| || |||| ||||| ||| | ||
Sbjct 2726684 GGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTAT--GTCTC 2726741
Query 48440 GGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTG 48499
|||||||| ||||| || || || || ||||| ||||| | ||||||| ||| ||
Sbjct 2726742 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTG 2726801
Query 48500 TACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAA 48559
|| || | | | || ||| |||| ||||| || || || |||||| || || ||
Sbjct 2726802 GACTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGCGAA 2726861
Query 48560 AAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTT---ATTCCAGTC 48616
|| || || | | | ||| || ||| ||||||| ||| || ||||||||
Sbjct 2726862 GAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCAACTTGTGGTTCCAGTC 2726921
Query 48617 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTT 48676
| || |||| || | || | |||||| || ||||| || || || || || || ||
Sbjct 2726922 AGTGGTATCCTTACTCAAGTCGATTTCTTCGGCGGTCCAGAAGGAGGCTTCAGCCTTCTT 2726981
Query 48677 ATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
||||| | ||| | ||| ||| | ||||||||| | ||| ||
Sbjct 2726982 GTACATTTGCCAGACTTCATGGTACTTGATTGGGAAGAGAACGAA 2727026
Score = 185 bits (204), Expect = 1e-41
Identities = 1342/2139 (63%), Gaps = 37/2139 (2%)
Strand=Plus/Plus
Query 76770 TTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATA 76829
|||||||| | || ||||| || | || || || | || ||| | || || ||||||
Sbjct 2773300 TTCTTATCAACAGTGAACTGGATGGCAGCAGCAGCAGCTTGTGTTCTTAAGTAATACATA 2773359
Query 76830 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTA 76889
||||| || | |||| |||| |||||||||||||| || || || |
Sbjct 2773360 CCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTACCCATTGTT 2773419
Query 76890 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 76949
|| || || || || |||| ||||| || || ||||| || |||| |||||
Sbjct 2773420 GGGTCCTTGATGTGGATGTTCAAAGACTGTGACTGGTCAATGAAGGCAGCTCTGTCAGCA 2773479
Query 76950 GCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATA 77009
||||| | ||||| |||||| | |||||||||| ||| || | | || |
Sbjct 2773480 GCCATGTCAATAATATGCTTTTGTGAGATTTCCCAAACAGTCTTATATAAGGCCTTAAGC 2773539
Query 77010 TCATCTGGAAGGTTTGTATTT---TGAATGGAACCACCATCTGATATAATTGTATTCTTT 77066
|||||||||| || | | || || |||||| | || || || | |||||
Sbjct 2773540 TCATCTGGAACATTAGGCAATGACTGGATAGAACCATTGTTAGAAATGATGTTGTTCTTC 2773599
Query 77067 ATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATT 77126
|| |||| ||||| | | || ||| | | | | | || || || ||
Sbjct 2773600 ATGGCATCGTTCCAGATACCCAAGTCGACCAAATCACGCAACAAGTATGGGTTGACAATC 2773659
Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186
|||||||| |||| ||| ||||| | || ||| || ||| || |||||||| | | ||
Sbjct 2773660 TGAAATTCACCAGCCAACACTCTTCTAGAGTAGATGTTAGATGTGTATGGTTCAAAACAT 2773719
Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246
|| ||||| ||||| ||||| | ||| || ||||||||||| || || ||||| ||| |
Sbjct 2773720 TCGTTGTTACCCAAGATTTGGGAAGTTGAGGCAGTTGGCATTGGGGCGACCAACAAAGAA 2773779
Query 77247 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAA 77306
||||| | ||| || | | || | || | | | ||| ||||| | || |
Sbjct 2773780 TTTCTCAAACCGTGCTTAGCCAACTTCTGCTTCAAGGAATCCCAGTCCCATAACTCAGTT 2773839
Query 77307 GGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATAT 77366
|| ||||| | || ||||||| | ||| | ||| || || | ||
Sbjct 2773840 GGCTTTCTGTCCCACAAGTCATATTGTAACAATCCTTGGGAAGCTGGAGAGCCCTCGTAA 2773899
Query 77367 GTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAA 77426
| || ||||| |||||| |||| | ||| | ||||| | || |||| |||
Sbjct 2773900 GACTCGTAAGGGCCTTCTTCGGCAGCCAATTCGATAGAGGCTTCAACGGCACCGTGATAG 2773959
Query 77427 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGT 77486
|| ||||| || || | | || | ||| || || || || || |||| |
Sbjct 2773960 ATAGTTTCAAAGATTTGGATGTTCAATTCTCTAGCCTCTTGGGAGTCGAATGG-TAATCT 2774018
Query 77487 AAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 77545
|| | || |||| ||| || || || || || || | | |||| ||||| | ||||||
Sbjct 2774019 CAATGCCATGAAGGTATCAGCCAAACCTTGGACACCCAAAGCAATTGGTCTGTTTCTCTT 2774078
Query 77546 ATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605
|| || | | |||||| |||| || || || || |||| || || || || | ||
Sbjct 2774079 GTTAGATCTCTCAGCTTCCGGAACTGGGTAGTAGTTTCTGTCAATGATCTTGTTCAAGTT 2774138
Query 77606 TCTAACAACT-ACTT--TAACCACGTCCT--TT-----AGTT-TAAGAAAATCAAAT-CT 77653
| | || |||| | || ||| | || |||| || | || | | ||
Sbjct 2774139 ACGAGTGACGGACTTGGTGACTTCGTGCAACTTCTCAAAGTTGTACCACAAAGACTTGCT 2774198
Query 77654 -TCCATCTATAACAAAC-ATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCA 77711
||| ||| | |||| | | | ||||| || || || | ||||| || || || ||
Sbjct 2774199 GTCCTTCTC-AGCAAAGGAAGGT-AAAGCAATGGAGGCCAAGTTACAGACAGCAACTTCC 2774256
Query 77712 TTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGA 77771
| | | | || | || || || ||| | ||| | | ||||| | ||||
Sbjct 2774257 TCTGGGGAAGAGTACTCTACGATTTCACAACACAAGTTAGAAGACTTGATTATACCCAAG 2774316
Query 77772 TTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTT 77831
|| | ||||||| |||| || || || | |||||| || | || || ||||| |||||
Sbjct 2774317 TTCTTTTGGTTGGTCTTCTTGTTACAGGCGTCCTTGTACAACATGAAAGGAGTACCGGTC 2774376
Query 77832 TCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG--CTTTTATCATAGATTTGT 77889
||| |||| | || | ||| | | ||| | ||| | | | || | || | || |
Sbjct 2774377 TCAGTCTGGGCCTCCAAAATGGCGTACCACA--ACTTTTGGGCCTTGA-CAGTGTTTCTT 2774433
Query 77890 A-TCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCA 77948
|| | ||||| || || | || | | ||| ||||| || || | || ||
Sbjct 2774434 CCTCTACCTTCTCTCTCGTAACGTTCGTACAACTCTTCGAATTCGTCACCGTATACTTCT 2774493
Query 77949 TCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGT 78008
||| || || ||| ||||| | | | | ||| ||||| | || | ||||
Sbjct 2774494 GGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATCACCGTTTTGTTCGACTCTC 2774553
Query 78009 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCA 78068
||||| || | || || ||||| | ||| || | ||||| | |||| |||||
Sbjct 2774554 TTCATGAACAAGTCTGGAATCCACAAAGCTGGGAACAAATCTCTAGCTCTAATCTCTTCC 2774613
Query 78069 TTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 78128
|| || |||||| | | ||| | || || | ||| || | ||||||||||| |
Sbjct 2774614 TTACCGTGGTTCTTTCTGATATCAATGAAGTCGAAAATGTCTGCGTGCCATGGTTCCAAG 2774673
Query 78129 TATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTA 78188
|||| || | | | || || || || ||||| || || || | ||||| || || |||
Sbjct 2774674 TATAAGGCAAAAGCACCTGGACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTATTA 2774733
Query 78189 TTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248
|| | || | | ||||||||| |||||||| ||||| || || || |||| ||| ||
Sbjct 2774734 TTGAAGACACGAACCATTGGAATGATACCGTTGGATGTACCGTTAGTACCAGCAATGTAG 2774793
Query 78249 CTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATT 78308
||| | | ||||| || ||| || || || || || || |||| || ||
Sbjct 2774794 GCACCAGTAGAACGAATGTTGTGGATGTGTAAACCAATACCACCAGCACTCTTGGAAATC 2774853
Query 78309 AGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGA 78368
| || || || || || ||||| || || || ||| ||| ||| ||||| | |
Sbjct 2774854 AAGGCACAGGTCTTTAAAGTGTCGTAAATTCCGTCAATAGAGTCGTCCTTCATGGCGACA 2774913
Query 78369 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428
|| ||||| ||||||||| || || || || || || || || ||||| |
Sbjct 2774914 AGGAAACAAGAAGACATTTGTGGAGATGGGGTACCAGCGTTGAACAAAGTTGGAGAACCG 2774973
Query 78429 TGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCA 78487
|| || || | || || | | ||||| | |||||| | || || || ||
Sbjct 2774974 TGAGTGAAGAAACGTTGGGACATCAAGTTGTAAGATTCAATGACCTTCTCGATATCATCA 2775033
Query 78488 TTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATT 78547
| || || || | | || | ||| | || ||| || ||||||||| | ||||
Sbjct 2775034 CCG-TGGATACCAATAGAAACTCTCATAATCAAATGTTGTGGTCTTTCAGCAACCTTACC 2775092
Query 78548 ATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 78607
|| | || | ||||||| | || || || || |||||||| ||||| || ||
Sbjct 2775093 GTTGACACGTAAAAGGTATGATCTCTCTAAGGTCTTGAAACCAAAGTAGTTATAATTGAA 2775152
Query 78608 GTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC-CA 78666
||| | ||||| | || | || || | | || || ||| | ||||| |
Sbjct 2775153 GTCACGATCGTAGACGATGGCCGAGTTCAACTCGTCCGCGTGCTTGAGGATGATATCGTA 2775212
Query 78667 TGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATA 78726
|| | | || || |||||||| | | |||| | || || || | || | ||
Sbjct 2775213 TGTTTCT-TTCGAGATCATAGGAGAGTGCAAACCAGTCTTTGGGTTGATGTA--TTCGTA 2775269
Query 78727 AATCTTCCATTACATCACTAA--ATAGtttttttGTTTCCTTGTGTAGATTAGATACAGC 78784
| || | ||| || | || | || | |||| |||||| | || || |||||
Sbjct 2775270 CAACTCCTTGGACACGGCTGAGTATTGCTTGGTGGTTTGCTTGTGCAAGTTGGAAACAGC 2775329
Query 78785 TATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT-GGCTGCTATTT 78843
||||| ||||| |||||||| || || || || ||||| || || ||| || | |
Sbjct 2775330 GATTCTGGCAGCAAGAATAGCGTAGTCTGGGTGGATGGTAGT-CATGTAGGCAGCAGTCT 2775388
Query 78844 CTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCAT 78882
| || || || |||| ||||| || || ||||| ||||
Sbjct 2775389 CGGCAGCCAAGTTATCCAACTCGATGGTGGTGACACCAT 2775427
>seq1
Length=3488706
Score = 118 bits (130), Expect = 1e-21
Identities = 196/283 (69%), Gaps = 0/283 (0%)
Strand=Plus/Minus
Query 77926 CAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACC 77985
|||| || ||||| || ||| ||||||| || ||| | |||| | | || ||||
Sbjct 3155161 CAAACTCTTCTCCGTAACAATCTGCCAATCCTGGAGCTTCGTCTGGGGAAAATAAGGACC 3155102
Query 77986 AGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATA 78045
| || ||| | || || | | ||| || | ||| || ||||||||| ||| ||| |
Sbjct 3155101 AATCCTCATTGTTTTTGACCCTCTCCATGAATAAATCCGGAATCCATAGACCAAAAAACA 3155042
Query 78046 GATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAA 78105
|||||| || || | || || || || ||||| || | ||| | | || | |
Sbjct 3155041 AATCTCGCGTCCTGAGCTCCTCTTTGCCGTGGTTCTTCTTCAAATCCAAGATTTCAAAGA 3154982
Query 78106 TATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCT 78165
|||||||||||||| |||| |||||| || | | |||| |||| ||| || ||||| |
Sbjct 3154981 CGTCAGAATGCCATGGCTCTAAATATATAGCAAAAGCTCCTGGTCTTTTGTTCCCTCCTT 3154922
Query 78166 GATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG 78208
|||| | |||||| || |||| |||| | ||| | | ||| ||
Sbjct 3154921 GATCCACATATCTAGCTGTGTCATTAAATACTTTAAGCATAGG 3154879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668713166400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |