Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2 185 1e-41 seq1 118 1e-21 >seq2 Length=3116340 Score = 185 bits (204), Expect = 1e-41 Identities = 578/885 (65%), Gaps = 20/885 (2%) Strand=Plus/Plus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || |||| || | |||||||| || ||||| || || | || || || || Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| || || ||||| || | || || | || || || || | |||| Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTGCCCAAAGC---AATC 2726265 Query 47970 AGT---CTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA-T 48025 | | || || |||||||| || | ||| ||||| ||| |||||||||| | Sbjct 2726266 AATAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAAT 2726325 Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT 48085 ||| |||||| | ||| || || | || ||||| ||||| ||||||| || || Sbjct 2726326 AAGGA-AACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAAT 2726384 Query 48086 TATCGATGTTACCGTTTCCTCACT-TGGTGGATACAACAAATGTTTAAACATTAAACATG 48144 ||| | | | | | || | |||| | ||| || |||| ||||| | Sbjct 2726385 GATCT-TCTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGAGAGAACAACAAACAGG 2726443 Query 48145 CAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204 | || || || | |||||| ||||||| || |||||||| || || || | ||| | Sbjct 2726444 CGAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCTG 2726503 Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264 |||||| || | || || | ||| || || | ||||| |||||| || || || | Sbjct 2726504 GCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGATAC 2726563 Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCC 48321 | || || || || || || | |||||| ||| | |||||| | || |||| Sbjct 2726564 CCTCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATCGTCAGAGATCC 2726623 Query 48322 ACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 48381 | | ||||| ||||||||||| | | ||| || || | || || || || || | Sbjct 2726624 ATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGCGTTGAAAA 2726683 Query 48382 GAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTA--AAAGACTATACATTTC 48439 | |||| ||| || || ||||||||||| || |||| ||||| ||| | || Sbjct 2726684 GGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTAT--GTCTC 2726741 Query 48440 GGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTG 48499 |||||||| ||||| || || || || ||||| ||||| | ||||||| ||| || Sbjct 2726742 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTG 2726801 Query 48500 TACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAA 48559 || || | | | || ||| |||| ||||| || || || |||||| || || || Sbjct 2726802 GACTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGCGAA 2726861 Query 48560 AAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTT---ATTCCAGTC 48616 || || || | | | ||| || ||| ||||||| ||| || |||||||| Sbjct 2726862 GAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCAACTTGTGGTTCCAGTC 2726921 Query 48617 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTT 48676 | || |||| || | || | |||||| || ||||| || || || || || || || Sbjct 2726922 AGTGGTATCCTTACTCAAGTCGATTTCTTCGGCGGTCCAGAAGGAGGCTTCAGCCTTCTT 2726981 Query 48677 ATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 ||||| | ||| | ||| ||| | ||||||||| | ||| || Sbjct 2726982 GTACATTTGCCAGACTTCATGGTACTTGATTGGGAAGAGAACGAA 2727026 Score = 185 bits (204), Expect = 1e-41 Identities = 1342/2139 (63%), Gaps = 37/2139 (2%) Strand=Plus/Plus Query 76770 TTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATA 76829 |||||||| | || ||||| || | || || || | || ||| | || || |||||| Sbjct 2773300 TTCTTATCAACAGTGAACTGGATGGCAGCAGCAGCAGCTTGTGTTCTTAAGTAATACATA 2773359 Query 76830 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTA 76889 ||||| || | |||| |||| |||||||||||||| || || || | Sbjct 2773360 CCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTACCCATTGTT 2773419 Query 76890 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 76949 || || || || || |||| ||||| || || ||||| || |||| ||||| Sbjct 2773420 GGGTCCTTGATGTGGATGTTCAAAGACTGTGACTGGTCAATGAAGGCAGCTCTGTCAGCA 2773479 Query 76950 GCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATA 77009 ||||| | ||||| |||||| | |||||||||| ||| || | | || | Sbjct 2773480 GCCATGTCAATAATATGCTTTTGTGAGATTTCCCAAACAGTCTTATATAAGGCCTTAAGC 2773539 Query 77010 TCATCTGGAAGGTTTGTATTT---TGAATGGAACCACCATCTGATATAATTGTATTCTTT 77066 |||||||||| || | | || || |||||| | || || || | ||||| Sbjct 2773540 TCATCTGGAACATTAGGCAATGACTGGATAGAACCATTGTTAGAAATGATGTTGTTCTTC 2773599 Query 77067 ATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATT 77126 || |||| ||||| | | || ||| | | | | | || || || || Sbjct 2773600 ATGGCATCGTTCCAGATACCCAAGTCGACCAAATCACGCAACAAGTATGGGTTGACAATC 2773659 Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 |||||||| |||| ||| ||||| | || ||| || ||| || |||||||| | | || Sbjct 2773660 TGAAATTCACCAGCCAACACTCTTCTAGAGTAGATGTTAGATGTGTATGGTTCAAAACAT 2773719 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 || ||||| ||||| ||||| | ||| || ||||||||||| || || ||||| ||| | Sbjct 2773720 TCGTTGTTACCCAAGATTTGGGAAGTTGAGGCAGTTGGCATTGGGGCGACCAACAAAGAA 2773779 Query 77247 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAA 77306 ||||| | ||| || | | || | || | | | ||| ||||| | || | Sbjct 2773780 TTTCTCAAACCGTGCTTAGCCAACTTCTGCTTCAAGGAATCCCAGTCCCATAACTCAGTT 2773839 Query 77307 GGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATAT 77366 || ||||| | || ||||||| | ||| | ||| || || | || Sbjct 2773840 GGCTTTCTGTCCCACAAGTCATATTGTAACAATCCTTGGGAAGCTGGAGAGCCCTCGTAA 2773899 Query 77367 GTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAA 77426 | || ||||| |||||| |||| | ||| | ||||| | || |||| ||| Sbjct 2773900 GACTCGTAAGGGCCTTCTTCGGCAGCCAATTCGATAGAGGCTTCAACGGCACCGTGATAG 2773959 Query 77427 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGT 77486 || ||||| || || | | || | ||| || || || || || |||| | Sbjct 2773960 ATAGTTTCAAAGATTTGGATGTTCAATTCTCTAGCCTCTTGGGAGTCGAATGG-TAATCT 2774018 Query 77487 AAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 77545 || | || |||| ||| || || || || || || | | |||| ||||| | |||||| Sbjct 2774019 CAATGCCATGAAGGTATCAGCCAAACCTTGGACACCCAAAGCAATTGGTCTGTTTCTCTT 2774078 Query 77546 ATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605 || || | | |||||| |||| || || || || |||| || || || || | || Sbjct 2774079 GTTAGATCTCTCAGCTTCCGGAACTGGGTAGTAGTTTCTGTCAATGATCTTGTTCAAGTT 2774138 Query 77606 TCTAACAACT-ACTT--TAACCACGTCCT--TT-----AGTT-TAAGAAAATCAAAT-CT 77653 | | || |||| | || ||| | || |||| || | || | | || Sbjct 2774139 ACGAGTGACGGACTTGGTGACTTCGTGCAACTTCTCAAAGTTGTACCACAAAGACTTGCT 2774198 Query 77654 -TCCATCTATAACAAAC-ATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCA 77711 ||| ||| | |||| | | | ||||| || || || | ||||| || || || || Sbjct 2774199 GTCCTTCTC-AGCAAAGGAAGGT-AAAGCAATGGAGGCCAAGTTACAGACAGCAACTTCC 2774256 Query 77712 TTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGA 77771 | | | | || | || || || ||| | ||| | | ||||| | |||| Sbjct 2774257 TCTGGGGAAGAGTACTCTACGATTTCACAACACAAGTTAGAAGACTTGATTATACCCAAG 2774316 Query 77772 TTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTT 77831 || | ||||||| |||| || || || | |||||| || | || || ||||| ||||| Sbjct 2774317 TTCTTTTGGTTGGTCTTCTTGTTACAGGCGTCCTTGTACAACATGAAAGGAGTACCGGTC 2774376 Query 77832 TCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG--CTTTTATCATAGATTTGT 77889 ||| |||| | || | ||| | | ||| | ||| | | | || | || | || | Sbjct 2774377 TCAGTCTGGGCCTCCAAAATGGCGTACCACA--ACTTTTGGGCCTTGA-CAGTGTTTCTT 2774433 Query 77890 A-TCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCA 77948 || | ||||| || || | || | | ||| ||||| || || | || || Sbjct 2774434 CCTCTACCTTCTCTCTCGTAACGTTCGTACAACTCTTCGAATTCGTCACCGTATACTTCT 2774493 Query 77949 TCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGT 78008 ||| || || ||| ||||| | | | | ||| ||||| | || | |||| Sbjct 2774494 GGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATCACCGTTTTGTTCGACTCTC 2774553 Query 78009 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCA 78068 ||||| || | || || ||||| | ||| || | ||||| | |||| ||||| Sbjct 2774554 TTCATGAACAAGTCTGGAATCCACAAAGCTGGGAACAAATCTCTAGCTCTAATCTCTTCC 2774613 Query 78069 TTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 78128 || || |||||| | | ||| | || || | ||| || | ||||||||||| | Sbjct 2774614 TTACCGTGGTTCTTTCTGATATCAATGAAGTCGAAAATGTCTGCGTGCCATGGTTCCAAG 2774673 Query 78129 TATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTA 78188 |||| || | | | || || || || ||||| || || || | ||||| || || ||| Sbjct 2774674 TATAAGGCAAAAGCACCTGGACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTATTA 2774733 Query 78189 TTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248 || | || | | ||||||||| |||||||| ||||| || || || |||| ||| || Sbjct 2774734 TTGAAGACACGAACCATTGGAATGATACCGTTGGATGTACCGTTAGTACCAGCAATGTAG 2774793 Query 78249 CTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATT 78308 ||| | | ||||| || ||| || || || || || || |||| || || Sbjct 2774794 GCACCAGTAGAACGAATGTTGTGGATGTGTAAACCAATACCACCAGCACTCTTGGAAATC 2774853 Query 78309 AGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGA 78368 | || || || || || ||||| || || || ||| ||| ||| ||||| | | Sbjct 2774854 AAGGCACAGGTCTTTAAAGTGTCGTAAATTCCGTCAATAGAGTCGTCCTTCATGGCGACA 2774913 Query 78369 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428 || ||||| ||||||||| || || || || || || || || ||||| | Sbjct 2774914 AGGAAACAAGAAGACATTTGTGGAGATGGGGTACCAGCGTTGAACAAAGTTGGAGAACCG 2774973 Query 78429 TGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCA 78487 || || || | || || | | ||||| | |||||| | || || || || Sbjct 2774974 TGAGTGAAGAAACGTTGGGACATCAAGTTGTAAGATTCAATGACCTTCTCGATATCATCA 2775033 Query 78488 TTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATT 78547 | || || || | | || | ||| | || ||| || ||||||||| | |||| Sbjct 2775034 CCG-TGGATACCAATAGAAACTCTCATAATCAAATGTTGTGGTCTTTCAGCAACCTTACC 2775092 Query 78548 ATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 78607 || | || | ||||||| | || || || || |||||||| ||||| || || Sbjct 2775093 GTTGACACGTAAAAGGTATGATCTCTCTAAGGTCTTGAAACCAAAGTAGTTATAATTGAA 2775152 Query 78608 GTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC-CA 78666 ||| | ||||| | || | || || | | || || ||| | ||||| | Sbjct 2775153 GTCACGATCGTAGACGATGGCCGAGTTCAACTCGTCCGCGTGCTTGAGGATGATATCGTA 2775212 Query 78667 TGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATA 78726 || | | || || |||||||| | | |||| | || || || | || | || Sbjct 2775213 TGTTTCT-TTCGAGATCATAGGAGAGTGCAAACCAGTCTTTGGGTTGATGTA--TTCGTA 2775269 Query 78727 AATCTTCCATTACATCACTAA--ATAGtttttttGTTTCCTTGTGTAGATTAGATACAGC 78784 | || | ||| || | || | || | |||| |||||| | || || ||||| Sbjct 2775270 CAACTCCTTGGACACGGCTGAGTATTGCTTGGTGGTTTGCTTGTGCAAGTTGGAAACAGC 2775329 Query 78785 TATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT-GGCTGCTATTT 78843 ||||| ||||| |||||||| || || || || ||||| || || ||| || | | Sbjct 2775330 GATTCTGGCAGCAAGAATAGCGTAGTCTGGGTGGATGGTAGT-CATGTAGGCAGCAGTCT 2775388 Query 78844 CTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCAT 78882 | || || || |||| ||||| || || ||||| |||| Sbjct 2775389 CGGCAGCCAAGTTATCCAACTCGATGGTGGTGACACCAT 2775427 >seq1 Length=3488706 Score = 118 bits (130), Expect = 1e-21 Identities = 196/283 (69%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 77926 CAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACC 77985 |||| || ||||| || ||| ||||||| || ||| | |||| | | || |||| Sbjct 3155161 CAAACTCTTCTCCGTAACAATCTGCCAATCCTGGAGCTTCGTCTGGGGAAAATAAGGACC 3155102 Query 77986 AGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATA 78045 | || ||| | || || | | ||| || | ||| || ||||||||| ||| ||| | Sbjct 3155101 AATCCTCATTGTTTTTGACCCTCTCCATGAATAAATCCGGAATCCATAGACCAAAAAACA 3155042 Query 78046 GATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAA 78105 |||||| || || | || || || || ||||| || | ||| | | || | | Sbjct 3155041 AATCTCGCGTCCTGAGCTCCTCTTTGCCGTGGTTCTTCTTCAAATCCAAGATTTCAAAGA 3154982 Query 78106 TATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCT 78165 |||||||||||||| |||| |||||| || | | |||| |||| ||| || ||||| | Sbjct 3154981 CGTCAGAATGCCATGGCTCTAAATATATAGCAAAAGCTCCTGGTCTTTTGTTCCCTCCTT 3154922 Query 78166 GATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG 78208 |||| | |||||| || |||| |||| | ||| | | ||| || Sbjct 3154921 GATCCACATATCTAGCTGTGTCATTAAATACTTTAAGCATAGG 3154879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668713166400