Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2 233 3e-56 seq1 118 2e-21 >seq2 Length=3116340 Score = 233 bits (258), Expect = 3e-56 Identities = 1189/1877 (63%), Gaps = 39/1877 (2%) Strand=Plus/Plus Query 75365 TTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATA 75424 |||||||| | |||||||| |||| || | || | || ||| | || || |||||| Sbjct 2773300 TTCTTATCAACAGTGAACTGGATGGCAGCAGCAGCAGCTTGTGTTCTTAAGTAATACATA 2773359 Query 75425 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTC 75484 ||||| || | |||| |||| |||||||||||||| || || || | Sbjct 2773360 CCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTACCCATTGTT 2773419 Query 75485 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 75544 || || || || || |||| ||||| || || ||||| || |||| ||||| Sbjct 2773420 GGGTCCTTGATGTGGATGTTCAAAGACTGTGACTGGTCAATGAAGGCAGCTCTGTCAGCA 2773479 Query 75545 GCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATA 75604 ||||| | ||||| |||||| | |||||||||| ||| || | | || | Sbjct 2773480 GCCATGTCAATAATATGCTTTTGTGAGATTTCCCAAACAGTCTTATATAAGGCCTTAAGC 2773539 Query 75605 TCATCTGGAAGATTTGTATTT---TGAATGGATCCGCCATCAGATATAATTGTATTCTTG 75661 |||||||||| ||| | | || || || || | ||| || || | ||||| Sbjct 2773540 TCATCTGGAACATTAGGCAATGACTGGATAGAACCATTGTTAGAAATGATGTTGTTCTTC 2773599 Query 75662 ATCTCATCATTCCACAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGAGGATTAACA 75718 || |||| ||||| | | | | ||| ||| | | | | | || || ||| Sbjct 2773600 ATGGCATCGTTCCAGA---TACCCAAGTCGACCAAATCACGCAACAAGTATGGGTTGACA 2773656 Query 75719 ATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACA 75778 || |||||||| |||| ||| ||||||| || ||| || ||| || |||||||| | | Sbjct 2773657 ATCTGAAATTCACCAGCCAACACTCTTCTAGAGTAGATGTTAGATGTGTATGGTTCAAAA 2773716 Query 75779 GATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAA 75838 |||| ||||| ||||| ||||| | |||||| ||||| ||||| || || ||||| ||| Sbjct 2773717 CATTCGTTGTTACCCAAGATTTGGGAAGTTGAGGCAGTTGGCATTGGGGCGACCAACAAA 2773776 Query 75839 CTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCT 75898 |||||| | ||| || | | || | || | | | ||| ||||| | || Sbjct 2773777 GAATTTCTCAAACCGTGCTTAGCCAACTTCTGCTTCAAGGAATCCCAGTCCCATAACTCA 2773836 Query 75899 GATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTA 75958 | ||| ||||| | || ||||||| | ||| | | ||| || || | Sbjct 2773837 GTTGGCTTTCTGTCCCACAAGTCATATTGTAACAATCCTTGGGAAGCTGGAGAGCCCTCG 2773896 Query 75959 TATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAA 76018 || | ||||||| || || | |||| | |||| | || || | ||||||| | Sbjct 2773897 TAAGACTCGTAAGGGCCTTCTTCGGCAGCCAATTCGATAGAGGCTTCAACGGCACCGTGA 2773956 Query 76019 TAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAA 76078 || || ||||| || || | | || | ||| || || | || || || ||| Sbjct 2773957 TAGATAGTTTCAAAGATTTGGATGTTCAATTCTCTAGCCTCTTGGGAGTCGAATGG-TAA 2774015 Query 76079 TGTAAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCT 76137 | | || | || || | ||| || | || || || || | | |||| ||||| | ||| Sbjct 2774016 TCTCAATGCCATGAAGGTATCAGCCAAACCTTGGACACCCAAAGCAATTGGTCTGTTTCT 2774075 Query 76138 CTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAG 76197 ||| || || | |||||||| |||| ||||| || || | || || || || || | Sbjct 2774076 CTTGTTAGATCTCTCAGCTTCCGGAACTGGGTAGTAGTTTCTGTCAATGATCTTGTTCAA 2774135 Query 76198 ATTTC---TGACA-ACT-----ACTTTAACCACGTCCTTTAGTTTG----AGAAAATCAA 76244 || | |||| ||| |||| || | || | ||| | ||| | Sbjct 2774136 GTTACGAGTGACGGACTTGGTGACTTCGTGCAACTTCTCAAAGTTGTACCACAAAGACTT 2774195 Query 76245 ATTTTCCATCTATCA-CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACC 76303 | ||| ||| || |||| | | ||| || || || | ||||| || || || Sbjct 2774196 GCTGTCCTTCT--CAGCAAAGGAAGGTAAAGCAATGGAGGCCAAGTTACAGACAGCAACT 2774253 Query 76304 TCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCA 76363 || | | | || | || || || || | ||| | ||||||| | || Sbjct 2774254 TCCTCTGGGGAAGAGTACTCTACGATTTCACAACACAAGTTAGAAGACTTGATTATACCC 2774313 Query 76364 AGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCA 76423 | || | ||||||| |||| |||||||| | |||||| || | | || ||||| || Sbjct 2774314 AAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCGTCCTTGTACAACATGAAAGGAGTACCG 2774373 Query 76424 GTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGA-TTT 76482 || ||| |||| | || | ||| | | ||| | ||| | | | | | || ||| Sbjct 2774374 GTCTCAGTCTGGGCCTCCAAAATGGCGTACCACA--ACTTTTGGGCCT-TGACAGTGTTT 2774430 Query 76483 GTATCGCTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACA 76540 | | || | ||||| || || || || ||| ||| ||||| || || | || Sbjct 2774431 CTTCCTCTACCTTCTCTCTCGTAACGTTCGTACAACTCTTCGAATTCGTCACCGTATACT 2774490 Query 76541 TCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACC 76600 || ||| || ||| ||| || ||| | | | | ||| ||||| | || | || Sbjct 2774491 TCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATCACCGTTTTGTTCGACT 2774550 Query 76601 CGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCT 76660 | ||||| || | || || ||||| | ||| || | ||||| | |||| ||| Sbjct 2774551 CTCTTCATGAACAAGTCTGGAATCCACAAAGCTGGGAACAAATCTCTAGCTCTAATCTCT 2774610 Query 76661 TCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCT 76720 || || || |||||| | | ||| | ||| || | ||| || | ||||||||||| Sbjct 2774611 TCCTTACCGTGGTTCTTTCTGATATCAATGAAGTCGAAAATGTCTGCGTGCCATGGTTCC 2774670 Query 76721 AGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTG 76780 | |||| || | | |||| || || || ||||| || || || | ||||| ||||| Sbjct 2774671 AAGTATAAGGCAAAAGCACCTGGACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTA 2774730 Query 76781 TTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATA 76840 ||||| | || | | ||||||||| || ||||| |||||||| || || |||| ||| Sbjct 2774731 TTATTGAAGACACGAACCATTGGAATGATACCGTTGGATGTACCGTTAGTACCAGCAATG 2774790 Query 76841 TAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAG 76900 || ||| | |||||| || || || || || || || || | || || Sbjct 2774791 TAGGCACCAGTAGAACGAATGTTGTGGATGTGTAAACCAATACCACCAGCACTCTTGGAA 2774850 Query 76901 ATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTA 76960 || | |||||| || || ||||| || || || || ||| || ||| ||||| Sbjct 2774851 ATCAAGGCACAGGTCTTTAAAGTGTCGTAAATTCCGTCAATAGAGTCGTCCTTCATGGCG 2774910 Query 76961 AGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGAT 77020 | ||| ||||| ||||||||| || || || || || ||||| || ||||| Sbjct 2774911 ACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTACCAGCGTTGAACAAAGTTGGAGAA 2774970 Query 77021 GCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCT--ATAT 77078 | |||||||| | || || | | ||||| | |||||| || ||||| |||| Sbjct 2774971 CCGTGAGTGAAGAAACGTTGGGACATCAAGTTGTAAGATTCAATGAC--CTTCTCGATAT 2775028 Query 77079 C-CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTC 77137 | || | || || || | || || | ||| | || ||| || |||| ||| || | Sbjct 2775029 CATCACCG-TGGATACCAATAGAAACTCTCATAATCAAATGTTGTGGTCTTTCAGCAACC 2775087 Query 77138 TTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 77197 ||| || | || | ||||||| | || || || || |||||||| ||||| || Sbjct 2775088 TTACCGTTGACACGTAAAAGGTATGATCTCTCTAAGGTCTTGAAACCAAAGTAGTTATAA 2775147 Query 77198 GAAAAGTCTCTTTCGTA 77214 ||||| | ||||| Sbjct 2775148 TTGAAGTCACGATCGTA 2775164 Score = 170 bits (188), Expect = 3e-37 Identities = 577/892 (65%), Gaps = 34/892 (4%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| |||| || | |||||||| || ||||| || || | || || || || Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || || || || || || || || || | || || || || | |||| Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTGCCCAAAGC---AATC 2726265 Query 46459 AGT---CTATCTGCAACGAATTCTATATACGTTTT----CATCATTTCACAATTCATTCC 46511 | | || || |||||||| || | ||| || ||||| ||| |||||||| Sbjct 2726266 AATAATCTGTCGGCAACGAACTCGA----CGTATTGACACATCAATTCGGCGTTCATTCC 2726321 Query 46512 TATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGA 46571 || | || || | ||| || || | || ||||| || || ||||||| || | Sbjct 2726322 TAATAAGGAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGT 2726381 Query 46572 TATTATCGATGTTACTGTTTCCTCACTTGGT---GGATGCAT--CAAATGTTTAAACATT 46626 || ||| | || | ||| ||| | || | ||| || |||| Sbjct 2726382 AATGATC-----TTCTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGAGAGAACAAC 2726436 Query 46627 AAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 46686 ||||| || || || || | ||||| ||||||| || |||||||| || || || Sbjct 2726437 AAACAGGCGAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTC 2726496 Query 46687 AGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAG 46746 | || ||||||| || | ||| || | ||| || |||| ||||| |||||| || Sbjct 2726497 AAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAA 2726556 Query 46747 AATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA 46806 || || || || ||||| ||||| || || | |||||| ||| | ||| |||| | | Sbjct 2726557 AAGATACCCTCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATCGTCA 2726616 Query 46807 ---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCA 46863 ||||| || ||||| |||||||| || | | ||| || || | || || || Sbjct 2726617 GAGATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGCG 2726676 Query 46864 TTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAA--AAGACTAT 46921 || || || |||| ||| | | || ||||| || || || ||||| |||| ||| Sbjct 2726677 TTGAAAAGGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTAT 2726736 Query 46922 ACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAG 46981 | || || ||||||||||| || || || || ||||| ||||| | ||||| | Sbjct 2726737 G--TCTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTG 2726794 Query 46982 TAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAG 47041 || || || || | | | || ||| ||| ||||| || || || |||||| | Sbjct 2726795 GGATTTGGACTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGG 2726854 Query 47042 CAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTT---AT 47098 | || || || ||||| | | | ||| || ||| |||| | | ||| || | Sbjct 2726855 CGGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCAACTTGTGGT 2726914 Query 47099 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTG 47158 |||||||| || |||| || | || | |||||| || |||||||| || || || | Sbjct 2726915 TCCAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCGGCGGTCCAGAAGGAGGCTTCAG 2726974 Query 47159 CTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 | || || ||||| | ||| | ||| | || | ||| || || | ||| || Sbjct 2726975 CCTTCTTGTACATTTGCCAGACTTCATGGTACTTGATTGGGAAGAGAACGAA 2727026 >seq1 Length=3488706 Score = 118 bits (130), Expect = 2e-21 Identities = 212/310 (68%), Gaps = 0/310 (0%) Strand=Plus/Minus Query 76521 CAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACC 76580 |||| || ||||| || ||| |||| || ||| ||| | || | | || |||| Sbjct 3155161 CAAACTCTTCTCCGTAACAATCTGCCAATCCTGGAGCTTCGTCTGGGGAAAATAAGGACC 3155102 Query 76581 ACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATA 76640 | || ||| | || |||| | ||| || | ||| || ||||||||| ||| ||| | Sbjct 3155101 AATCCTCATTGTTTTTGACCCTCTCCATGAATAAATCCGGAATCCATAGACCAAAAAACA 3155042 Query 76641 GATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAA 76700 |||||| || || | || || || || ||||| || | ||| | || || | | Sbjct 3155041 AATCTCGCGTCCTGAGCTCCTCTTTGCCGTGGTTCTTCTTCAAATCCAAGATTTCAAAGA 3154982 Query 76701 TATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCT 76760 |||||||||||||| |||| |||||| || | | | || |||| ||| || ||||| | Sbjct 3154981 CGTCAGAATGCCATGGCTCTAAATATATAGCAAAAGCTCCTGGTCTTTTGTTCCCTCCTT 3154922 Query 76761 GATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATG 76820 |||| | |||||| || |||| |||| | ||| | | ||| || | | || | | || Sbjct 3154921 GATCCACATATCTAGCTGTGTCATTAAATACTTTAAGCATAGGCACCAACCCACTGGCTG 3154862 Query 76821 TACCATTTGT 76830 ||||||| || Sbjct 3154861 TACCATTGGT 3154852 Score = 116 bits (128), Expect = 5e-21 Identities = 340/520 (65%), Gaps = 4/520 (1%) Strand=Plus/Minus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| || ||||| |||| ||||| | || ||| || | |||||||| ||||||| Sbjct 3156343 CAACAGTAAACTGGATGGCTCTTGATGCAGCTTGTGTTCGCAAGTAGTACATTCCAGTTT 3156284 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | | ||| |||| |||| ||||| || || || || | | | || | Sbjct 3156283 TCAATCCCTTGTTCCAAGCGTAAAAATGACAACTCGTAAGCTTTCCAAACGTTGGGTTTT 3156224 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 || ||||||||||| ||| || || || || ||||||||| |||||||| | Sbjct 3156223 GTAAGTGAATATTCATACTCTGCAGCTGGTCAATAAACTTTCCTCTATCGGCCGCCATGT 3156164 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 | |||| |||||| | ||| ||||| | |||||| | | | || || || | || Sbjct 3156163 CGACAATGACCTTTTGCGAAATCTCCCACACAGTTTTATACAAGTCCTTTATCTCCTGTG 3156104 Query 75612 GAAGATTT-GTAT--TTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 | | |||| |||| | ||||||||||| ||| ||||| | ||| | ||| || Sbjct 3156103 GGATATTTGGTATGCTCTGAATGGATCCATTTTCAAGAATAATCTTGTTCCTCATCGCAG 3156044 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 |||| || | ||| ||||| | | | || | ||| || || || || | Sbjct 3156043 ACGTCCATAAACCTAAGTCGATTAAATCCTTCAATAGGTACTTATTTACTATCTGGAACT 3155984 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 ||||||| | ||||||| || || | ||| ||||| || || | ||||||| Sbjct 3155983 CTCCAGAAAGCACTCTTCTTGTATATAAATTGGAAGTATACGGCTCAAAGCATTCATTAA 3155924 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848 || | ||| || | ||| || ||||| ||||| |||||||| || || ||||||| Sbjct 3155923 AGCCGAGAATCTGTGAAGTCGATGCAGTAGGCATCGGTGCCACTAACAAGGAGTTTCTGA 3155864 Query 75849 GACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATC 75888 | |||||| | ||| || || |||| | | |||||| Sbjct 3155863 GGCCATGTACTTTGACTTGATTCTTTAATTCATCCCAATC 3155824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934310883200