Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq8 176 9e-39 seq6 143 6e-29 seq4 91.5 3e-13 >seq8 Length=506948 Score = 176 bits (194), Expect = 9e-39 Identities = 154/192 (80%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | ||| || | || || || | ||| || || || || Sbjct 221933 TTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAA 221874 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| |||||||||||||| |||||||| ||||||||||||||||| | || ||| | Sbjct 221873 GATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTT 221814 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| ||||||||| ||||| || |||||||| ||||||||||| || Sbjct 221813 GTCAATGGTGTCAGAAGATTCGACTTCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGAC 221754 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 221753 GAAAATTTGCAT 221742 Score = 176 bits (194), Expect = 9e-39 Identities = 154/192 (80%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| ||| || | || || || | ||| || || ||||| Sbjct 222617 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 222558 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||||||||| |||||||| ||||||||||||||||| | || ||| | Sbjct 222557 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTT 222498 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| || | || |||||||| ||||| |||||||| ||||||||||| || Sbjct 222497 GTCAATAGTGTCAGAGGACTCAACTTCGAGGGTGATAGTCTTACCGGTCAAAGTCTTGAC 222438 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 222437 GAAAATTTGCAT 222426 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | | ||||| || | ||| ||| ||||||||||||||||||| Sbjct 222197 ACCACCTCTCAATCTTAATACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 222138 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | ||| || || | ||| || || ||||||||||| | ||||||||| || Sbjct 222137 TAAGGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 222078 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| ||||||||||||||||| | || ||| | || || ||||| |||| ||| || Sbjct 222077 AATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCAAC 222018 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| ||||| || |||||||| ||||||||||| ||||| || ||||| Sbjct 222017 TTCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221970 Score = 167 bits (184), Expect = 5e-36 Identities = 152/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| | || | ||| || |||| ||| || ||||| || Sbjct 222389 TTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTGCCGTCTTCTAATTGCTTACCGGCGAA 222330 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||||||| |||||||| ||||||||||||||||| | || ||| | Sbjct 222329 AATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTT 222270 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| || | |||||||| ||||| || |||||||| ||||| ||||| || Sbjct 222269 GTCAATAGTGTCAGAGGACTCGACTTCAAGAGTAATAGTCTTACCAGTCAAGGTCTTGAC 222210 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 222209 GAAAATTTGCAT 222198 Score = 163 bits (180), Expect = 6e-35 Identities = 155/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | ||| || | || || || | ||| || || || || Sbjct 221705 TTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAA 221646 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| |||||||||||||| |||||||| ||||| ||||||||||| | || ||| | Sbjct 221645 GATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTGGACTTGACGTT 221586 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| | || || |||||||| ||||| |||||||| Sbjct 221585 GTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTCTTACCGGTCAATGTCTTAAC 221526 Query 283088 GAATATCTGCATTTTCAT 283105 ||| || ||||| || || Sbjct 221525 GAAGATTTGCATGTTTAT 221508 >seq6 Length=1682205 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || || ||| ||| || |||||||||||||||| ||| || | || || || Sbjct 47324 ACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCC 47265 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | || || || || |||||||| | |||||||||| |||||||| |||||||| || Sbjct 47264 AACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGA 47205 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || || ||||| || | |||||||| | || || |||||| Sbjct 47204 ATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTA 47145 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || |||||||| ||||| || |||||||| Sbjct 47144 CCAGTTAAAGTCTTGACGAAAATTTGCATTTT 47113 >seq4 Length=2271750 Score = 91.5 bits (100), Expect = 3e-13 Identities = 176/256 (69%), Gaps = 8/256 (3%) Strand=Plus/Minus Query 316950 GAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGCAGT 317009 ||| ||| || || |||| || | || || || | ||| ||||| || || | || Sbjct 1796298 GAATTCAGAGACAGTGGTGTCAGCGTGGGTACCATCAATGTCGTGCTCGACGTAAACGGT 1796239 Query 317010 TTTCAGAATATCCTTCG-TCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCA 317068 || | | | | ||| | | ||||| ||||| | |||||||| |||| || ||||||| Sbjct 1796238 CTT-ACATTCTTCTTGGGTTGGGAAACCTTCGACTTGACCGTTAGCAATAGCTCTCATCA 1796180 Query 317069 GTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGA---TTTCCCTTCTTCA 317125 || ||||| || ||||| || || || || | |||||| | |||| |||||| Sbjct 1796179 AGGTAGACTTACCGGCACCGTTTGGACCACACAAACCATATCTTCTGTTTC---TCTTCA 1796123 Query 317126 GATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAAT 317185 | || |||| ||||||| | ||||| |||| || |||| |||||||||||| | Sbjct 1796122 ATCTGAATTGGGTCTTGTTCAACAAGATCTTGGCACCGTAAGCCAAAGAGAACTCACAGT 1796063 Query 317186 CACACAGGTCCTCGCC 317201 ||| | ||| || || Sbjct 1796062 TACATAAGTCTTCACC 1796047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739065886540