Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq8 176 9e-39
seq6 143 6e-29
seq4 91.5 3e-13
>seq8
Length=506948
Score = 176 bits (194), Expect = 9e-39
Identities = 154/192 (80%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | ||| || | || || || | ||| || || || ||
Sbjct 221933 TTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAA 221874
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| |||||||||||||| |||||||| ||||||||||||||||| | || ||| |
Sbjct 221873 GATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTT 221814
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| ||||||||| ||||| || |||||||| ||||||||||| ||
Sbjct 221813 GTCAATGGTGTCAGAAGATTCGACTTCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGAC 221754
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 221753 GAAAATTTGCAT 221742
Score = 176 bits (194), Expect = 9e-39
Identities = 154/192 (80%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| ||| || | || || || | ||| || || |||||
Sbjct 222617 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 222558
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||||||| |||||||| ||||||||||||||||| | || ||| |
Sbjct 222557 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTT 222498
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| || | || |||||||| ||||| |||||||| ||||||||||| ||
Sbjct 222497 GTCAATAGTGTCAGAGGACTCAACTTCGAGGGTGATAGTCTTACCGGTCAAAGTCTTGAC 222438
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 222437 GAAAATTTGCAT 222426
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | | ||||| || | ||| ||| |||||||||||||||||||
Sbjct 222197 ACCACCTCTCAATCTTAATACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 222138
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || | ||| || || | ||| || || ||||||||||| | ||||||||| ||
Sbjct 222137 TAAGGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 222078
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| ||||||||||||||||| | || ||| | || || ||||| |||| ||| ||
Sbjct 222077 AATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCAAC 222018
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| ||||| || |||||||| ||||||||||| ||||| || |||||
Sbjct 222017 TTCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221970
Score = 167 bits (184), Expect = 5e-36
Identities = 152/192 (79%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | ||| || |||| ||| || ||||| ||
Sbjct 222389 TTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTGCCGTCTTCTAATTGCTTACCGGCGAA 222330
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | ||||||||| |||||||| ||||||||||||||||| | || ||| |
Sbjct 222329 AATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTT 222270
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| || | |||||||| ||||| || |||||||| ||||| ||||| ||
Sbjct 222269 GTCAATAGTGTCAGAGGACTCGACTTCAAGAGTAATAGTCTTACCAGTCAAGGTCTTGAC 222210
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 222209 GAAAATTTGCAT 222198
Score = 163 bits (180), Expect = 6e-35
Identities = 155/198 (78%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | ||| || | || || || | ||| || || || ||
Sbjct 221705 TTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAA 221646
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| |||||||||||||| |||||||| ||||| ||||||||||| | || ||| |
Sbjct 221645 GATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTGGACTTGACGTT 221586
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||| ||||| | || || |||||||| ||||| ||||||||
Sbjct 221585 GTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTCTTACCGGTCAATGTCTTAAC 221526
Query 283088 GAATATCTGCATTTTCAT 283105
||| || ||||| || ||
Sbjct 221525 GAAGATTTGCATGTTTAT 221508
>seq6
Length=1682205
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||| || |||||||||||||||| ||| || | || || ||
Sbjct 47324 ACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCC 47265
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| || || || || |||||||| | |||||||||| |||||||| |||||||| ||
Sbjct 47264 AACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGA 47205
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| || | |||||||| | || || ||||||
Sbjct 47204 ATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTA 47145
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || |||||||| ||||| || ||||||||
Sbjct 47144 CCAGTTAAAGTCTTGACGAAAATTTGCATTTT 47113
>seq4
Length=2271750
Score = 91.5 bits (100), Expect = 3e-13
Identities = 176/256 (69%), Gaps = 8/256 (3%)
Strand=Plus/Minus
Query 316950 GAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGCAGT 317009
||| ||| || || |||| || | || || || | ||| ||||| || || | ||
Sbjct 1796298 GAATTCAGAGACAGTGGTGTCAGCGTGGGTACCATCAATGTCGTGCTCGACGTAAACGGT 1796239
Query 317010 TTTCAGAATATCCTTCG-TCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCA 317068
|| | | | | ||| | | ||||| ||||| | |||||||| |||| || |||||||
Sbjct 1796238 CTT-ACATTCTTCTTGGGTTGGGAAACCTTCGACTTGACCGTTAGCAATAGCTCTCATCA 1796180
Query 317069 GTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGA---TTTCCCTTCTTCA 317125
|| ||||| || ||||| || || || || | |||||| | |||| ||||||
Sbjct 1796179 AGGTAGACTTACCGGCACCGTTTGGACCACACAAACCATATCTTCTGTTTC---TCTTCA 1796123
Query 317126 GATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAAT 317185
| || |||| ||||||| | ||||| |||| || |||| |||||||||||| |
Sbjct 1796122 ATCTGAATTGGGTCTTGTTCAACAAGATCTTGGCACCGTAAGCCAAAGAGAACTCACAGT 1796063
Query 317186 CACACAGGTCCTCGCC 317201
||| | ||| || ||
Sbjct 1796062 TACATAAGTCTTCACC 1796047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739065886540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |