Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2 140 3e-28 >seq2 Length=3116340 Score = 140 bits (154), Expect = 3e-28 Identities = 485/748 (65%), Gaps = 23/748 (3%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCT 23263 ||| ||||| ||||| || || | || | |||| ||||| || || |||||||| Sbjct 2726136 CATGACACCGGCCTTTTGGTAGTCACTGACTC-TCTTCTCGAAGAAGTTAGTCTTACCAG 2726194 Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATG 23323 |||| || || || ||||| || || ||||| || | || || || ||| | || Sbjct 2726195 CTAAGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTGACGTTGTAGAC--CTT--CTTG 2726250 Query 23324 AT----AATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCA 23379 | || | | || | || || || || || || | |||||||||||||| || Sbjct 2726251 TTGCCCAAAGCAATCAATAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCG 2726310 Query 23380 TAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAA 23439 ||| || |||| || ||||| | |||||| |||||| || || || Sbjct 2726311 GCGTTCATTCCTAATAAGGAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTG 2726370 Query 23440 ACAGCATCTTTAATTATTTG---AACAATAACTTCTTCACTAGGTGGATATTTTAAATAC 23496 ||||| || |||| || | |||||||||| || ||| | || || | Sbjct 2726371 ACAGCTTCAGTAATGATCTTCTCAACAATAACTGGGTCT---GGTCTGTTTTGCAAGTGA 2726427 Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556 ||||| ||||| || || || |||| ||||| || |||| |||||||| || Sbjct 2726428 GAGAACAACAAACAGGCGAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTG 2726487 Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616 || || || || ||||||||||| |||| || || | ||| || || | ||| || ||| Sbjct 2726488 GAGAAAGTCAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGAT 2726547 Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676 || || || |||||||||||||| || || || || | | ||| || || Sbjct 2726548 CCACTGAAAAAGATACCCTCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCT 2726607 Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTT 23736 | || ||||| |||||| | | ||| | ||||||| | | | ||| ||| | Sbjct 2726608 TCATCGTCAGAGATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTG 2726667 Query 23737 TCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTA---TCTGTTATATATGTATCAATT 23793 || || || || || || || | |||| ||| || | | || || |||||| Sbjct 2726668 TCGATGGCGTTGAAAAGGAA---GTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATT 2726724 Query 23794 AGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACAT 23853 | |||| || | ||||| ||||| ||||| || ||| || || || || ||||| Sbjct 2726725 AATAAAGAGTATGTCTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACAC 2726784 Query 23854 CTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATA 23913 | ||||| | | ||| || ||| | | || | | | | || || ||||| |||||| Sbjct 2726785 TTGGCTTCTGGGATTTGGACTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATA 2726844 Query 23914 CCATCACTAGCAGCAAAGAAAG-CAAGA 23940 |||||| || || ||||||| ||||| Sbjct 2726845 CCATCAGAGGCGGCGAAGAAAGCCAAGA 2726872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487934814000