Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq8 134 1e-26 seq6 118 8e-22 >seq8 Length=506948 Score = 134 bits (148), Expect = 1e-26 Identities = 173/237 (73%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||| || |||| |||||| ||| ||||||||||||||||| Sbjct 221747 TTGCATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTA 221688 Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||| ||||| | |||| |||| ||||| || || ||||| ||||| || || Sbjct 221687 GTCGGAAAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGG 221630 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| || | ||||||||| || ||||| ||| | | | || ||||| | Sbjct 221629 TCTGGTGGAATACCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCAATAGTGTCAGAA 221570 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| || |||| ||||| ||||| || || | ||||| ||||||||||||||| Sbjct 221569 GATTCAACTTCCAAGGTAATGGTCTTACCGGTCAATGTCTTAACGAAGATTTGCATG 221513 Score = 127 bits (140), Expect = 1e-24 Identities = 171/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||| || |||| |||||| ||| ||||||||||||||||| Sbjct 221975 TTGCATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTA 221916 Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||| ||||| | |||| |||| ||||| || || ||||| ||||| || || Sbjct 221915 GTCGGAAAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGG 221858 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| || | ||||||||| || ||||| ||| | | | |||||||| | Sbjct 221857 TCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAA 221798 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 221797 GATTCGACTTCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221742 Score = 120 bits (132), Expect = 2e-22 Identities = 169/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||| || |||| |||||| ||| ||||||||||||||||| Sbjct 222203 TTGCATACCACCTCTCAATCTTAATACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTA 222144 Query 44164 ATCGGCGA-GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | | | || |||| |||| ||||| || ||||||||||| | || || | Sbjct 222143 GTCAGATAAGGTTCTGC-CGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGT 222085 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| || | ||||||||| || ||||| ||| | | | |||||||| | | Sbjct 222084 CTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAG 222025 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 222024 ATTCAACTTCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221970 Score = 118 bits (130), Expect = 8e-22 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169 || ||||||| |||||| |||| |||||| ||| ||||||||||||||||| || | Sbjct 222652 CCTCCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 222593 Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||||| | |||| |||| ||||| || ||||||||||| | || || |||| | Sbjct 222592 AGAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 222535 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCC 44287 | | ||||||||| || ||||| ||| || ||| | || ||||| | ||| || Sbjct 222534 GAATACCTTCCTTGTCTTGGATCTTGGACTT-AACGTTGTCAATAGTGTCAGAGGACTCA 222476 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || || ||||| || || | ||||| ||||| |||||||| Sbjct 222475 ACTTCGAGGGTGATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 222426 Score = 114 bits (126), Expect = 9e-21 Identities = 170/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||| || |||| |||||| ||| ||||||||||||||||| Sbjct 222431 TTGCATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTA 222372 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | || | || |||| || | ||||| ||||| || ||||| | || || | Sbjct 222371 GTCAGATAAGGTTCTGC-CGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGT 222313 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCG 44281 ||| || | ||||||||| || ||||| ||| || ||| | || ||||| | | Sbjct 222312 CTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTT-AACGTTGTCAATAGTGTCAGAG 222254 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | ||||| ||||| || || | |||||| ||||| |||||||| Sbjct 222253 GACTCGACTTCAAGAGTAATAGTCTTACCAGTCAAGGTCTTGACGAAAATTTGCAT 222198 >seq6 Length=1682205 Score = 118 bits (130), Expect = 8e-22 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || ||||||| ||| || |||| ||| | ||| ||||| ||||||||||| || | Sbjct 47342 CCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 47283 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||||| | |||| |||| |||||| || || |||||||| | || || || | | Sbjct 47282 AGAGTT--CTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTG 47225 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||||||||| ||| ||||| ||| || ||| | |||||||||| ||| || Sbjct 47224 GAATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGT--CAATGGTGTCGGAGGACTC 47167 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 47166 GACTTCCAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 47116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990356126170