Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq8 134 1e-26
seq6 118 8e-22
>seq8
Length=506948
Score = 134 bits (148), Expect = 1e-26
Identities = 173/237 (73%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||| || |||| |||||| ||| |||||||||||||||||
Sbjct 221747 TTGCATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTA 221688
Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| ||||| | |||| |||| ||||| || || ||||| ||||| || ||
Sbjct 221687 GTCGGAAAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGG 221630
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|||| || | ||||||||| || ||||| ||| | | | || ||||| |
Sbjct 221629 TCTGGTGGAATACCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCAATAGTGTCAGAA 221570
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| || |||| ||||| ||||| || || | ||||| |||||||||||||||
Sbjct 221569 GATTCAACTTCCAAGGTAATGGTCTTACCGGTCAATGTCTTAACGAAGATTTGCATG 221513
Score = 127 bits (140), Expect = 1e-24
Identities = 171/236 (72%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||| || |||| |||||| ||| |||||||||||||||||
Sbjct 221975 TTGCATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTA 221916
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| ||||| | |||| |||| ||||| || || ||||| ||||| || ||
Sbjct 221915 GTCGGAAAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGG 221858
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|||| || | ||||||||| || ||||| ||| | | | |||||||| |
Sbjct 221857 TCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAA 221798
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || || | ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 221797 GATTCGACTTCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221742
Score = 120 bits (132), Expect = 2e-22
Identities = 169/235 (72%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||| || |||| |||||| ||| |||||||||||||||||
Sbjct 222203 TTGCATACCACCTCTCAATCTTAATACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTA 222144
Query 44164 ATCGGCGA-GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|| | | | | || |||| |||| ||||| || ||||||||||| | || || |
Sbjct 222143 GTCAGATAAGGTTCTGC-CGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGT 222085
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282
||| || | ||||||||| || ||||| ||| | | | |||||||| | |
Sbjct 222084 CTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAG 222025
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || || | ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 222024 ATTCAACTTCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221970
Score = 118 bits (130), Expect = 8e-22
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169
|| ||||||| |||||| |||| |||||| ||| ||||||||||||||||| || |
Sbjct 222652 CCTCCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 222593
Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
||||| | |||| |||| ||||| || ||||||||||| | || || |||| |
Sbjct 222592 AGAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 222535
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCC 44287
| | ||||||||| || ||||| ||| || ||| | || ||||| | ||| ||
Sbjct 222534 GAATACCTTCCTTGTCTTGGATCTTGGACTT-AACGTTGTCAATAGTGTCAGAGGACTCA 222476
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | || || ||||| || || | ||||| ||||| ||||||||
Sbjct 222475 ACTTCGAGGGTGATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 222426
Score = 114 bits (126), Expect = 9e-21
Identities = 170/236 (72%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||| || |||| |||||| ||| |||||||||||||||||
Sbjct 222431 TTGCATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTA 222372
Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|| | || | || |||| || | ||||| ||||| || ||||| | || || |
Sbjct 222371 GTCAGATAAGGTTCTGC-CGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGT 222313
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCG 44281
||| || | ||||||||| || ||||| ||| || ||| | || ||||| | |
Sbjct 222312 CTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTT-AACGTTGTCAATAGTGTCAGAG 222254
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || || | ||||| ||||| || || | |||||| ||||| ||||||||
Sbjct 222253 GACTCGACTTCAAGAGTAATAGTCTTACCAGTCAAGGTCTTGACGAAAATTTGCAT 222198
>seq6
Length=1682205
Score = 118 bits (130), Expect = 8e-22
Identities = 167/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168
|| ||||||| ||| || |||| ||| | ||| ||||| ||||||||||| || |
Sbjct 47342 CCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 47283
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
||||| | |||| |||| |||||| || || |||||||| | || || || | |
Sbjct 47282 AGAGTT--CTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTG 47225
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | ||||||||| ||| ||||| ||| || ||| | |||||||||| ||| ||
Sbjct 47224 GAATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGT--CAATGGTGTCGGAGGACTC 47167
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||| ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 47166 GACTTCCAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 47116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990356126170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |