Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 1e-12 >seq1 Length=3044122 Score = 87.8 bits (96), Expect = 1e-12 Identities = 122/165 (74%), Gaps = 7/165 (4%) Strand=Plus/Plus Query 18796 TTGGCCCCA-TTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAA 18854 |||| ||| ||||||| ||||||||||||||||| ||||| ||||| || || ||| | Sbjct 1793527 TTGGGACCAGTTTACGGATTCCAGTGGAGACATTTCGGAGCTGAATACAAGGATTGTGAC 1793586 Query 18855 TCAAACTATTTACAG--CAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAA- 18911 || |||| || | |||||| | || ||| ||||| ||| || | | | ||||| Sbjct 1793587 ACAGACTA--CACCGGTCAAGGATTTGACCAGTTGCAAGATGTCATCAAGA-AGTTAAAG 1793643 Query 18912 ACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCA 18956 ||||||||| | | || |||| || || || ||||||||||| Sbjct 1793644 ACAAACCCATACGACAGAAGAATTATCATGTCCGCTTGGAATCCA 1793688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399503936703585