Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 9e-15
>seq1
Length=3044122
Score = 95.1 bits (104), Expect = 9e-15
Identities = 194/283 (69%), Gaps = 4/283 (1%)
Strand=Plus/Minus
Query 101882 AATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATT 101941
|| |||||||| || || || |||| || || ||||| ||||||||| ||||
Sbjct 1793729 AAGACATGACATGGTGGTAAGGCCATCTTTCCAAAGTCTGGTGGATTCCAAGCGGACATG 1793670
Query 101942 AACATCCTTCTATCTGTA-GGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTC 102000
| || ||||| || ||| |||||||| |||| | | || | | || || |||||
Sbjct 1793669 ATAATTCTTCTGTC-GTATGGGTTTGTCTTTAACTTCTTGATGACATCTTGCAACTGGTC 1793611
Query 102001 AACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCA 102060
|| ||||| || | || || || | | || ||||| ||||||||||| |||||
Sbjct 1793610 AAATCCTTGACCGGTGTAGTCTGTGTCACAATCCTTGTATTCAGCTCCGAAATGTCTCCA 1793551
Query 102061 CTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT-CTGTCATAAAAACCAAGTTTAT 102119
||| ||||| || || ||||| | ||| ||||| ||| | || ||||| | || |
Sbjct 1793550 CTGGAATCCGTAAACTGGTCCCAAATCACCTTC-TCTACGTTCGGTCAAACCCAACTTGT 1793492
Query 102120 CTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162
| || || | ||||||||| | ||||| || | ||||||
Sbjct 1793491 CCAAGAACTCACGAGATCCATTTCCTTCCCAGATTTTCACGCC 1793449
Score = 84.2 bits (92), Expect = 2e-11
Identities = 123/171 (72%), Gaps = 6/171 (4%)
Strand=Plus/Minus
Query 101657 GGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCT 101716
||||||| || || ||| || || ||||| |||||||| | ||| | || ||||||
Sbjct 1794011 GGAGTTCTTGTAAATTGCTCCTTGAGTGCATCTATGTGATCCAAATACACATGTGCATCT 1793952
Query 101717 CCTATAGTATGGATAAACTCTCCAGGCACTAGAT---TAGTGACATGAGCAATCATGCAA 101773
|| | ||||| |||||||| ||| || | || || | | || || ||||| |
Sbjct 1793951 CCCAATGTATGAATAAACTCGCCA--CAATCCATGTCTACT-ATGTGTGCTATCATCTTA 1793895
Query 101774 GTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCA 101824
|||||||| | ||| ||||||||||||||| || || || ||||| |||
Sbjct 1793894 GTTAAAAGGGCGTAGGAAGCAATGTTAAATGGAACACCCAAACCCATGTCA 1793844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361251142764263
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |