Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 9e-15 >seq1 Length=3044122 Score = 95.1 bits (104), Expect = 9e-15 Identities = 194/283 (69%), Gaps = 4/283 (1%) Strand=Plus/Minus Query 101882 AATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATT 101941 || |||||||| || || || |||| || || ||||| ||||||||| |||| Sbjct 1793729 AAGACATGACATGGTGGTAAGGCCATCTTTCCAAAGTCTGGTGGATTCCAAGCGGACATG 1793670 Query 101942 AACATCCTTCTATCTGTA-GGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTC 102000 | || ||||| || ||| |||||||| |||| | | || | | || || ||||| Sbjct 1793669 ATAATTCTTCTGTC-GTATGGGTTTGTCTTTAACTTCTTGATGACATCTTGCAACTGGTC 1793611 Query 102001 AACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCA 102060 || ||||| || | || || || | | || ||||| ||||||||||| ||||| Sbjct 1793610 AAATCCTTGACCGGTGTAGTCTGTGTCACAATCCTTGTATTCAGCTCCGAAATGTCTCCA 1793551 Query 102061 CTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT-CTGTCATAAAAACCAAGTTTAT 102119 ||| ||||| || || ||||| | ||| ||||| ||| | || ||||| | || | Sbjct 1793550 CTGGAATCCGTAAACTGGTCCCAAATCACCTTC-TCTACGTTCGGTCAAACCCAACTTGT 1793492 Query 102120 CTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162 | || || | ||||||||| | ||||| || | |||||| Sbjct 1793491 CCAAGAACTCACGAGATCCATTTCCTTCCCAGATTTTCACGCC 1793449 Score = 84.2 bits (92), Expect = 2e-11 Identities = 123/171 (72%), Gaps = 6/171 (4%) Strand=Plus/Minus Query 101657 GGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCT 101716 ||||||| || || ||| || || ||||| |||||||| | ||| | || |||||| Sbjct 1794011 GGAGTTCTTGTAAATTGCTCCTTGAGTGCATCTATGTGATCCAAATACACATGTGCATCT 1793952 Query 101717 CCTATAGTATGGATAAACTCTCCAGGCACTAGAT---TAGTGACATGAGCAATCATGCAA 101773 || | ||||| |||||||| ||| || | || || | | || || ||||| | Sbjct 1793951 CCCAATGTATGAATAAACTCGCCA--CAATCCATGTCTACT-ATGTGTGCTATCATCTTA 1793895 Query 101774 GTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCA 101824 |||||||| | ||| ||||||||||||||| || || || ||||| ||| Sbjct 1793894 GTTAAAAGGGCGTAGGAAGCAATGTTAAATGGAACACCCAAACCCATGTCA 1793844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251142764263