Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 seq2 82.4 9e-11 >seq4 Length=2182181 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | || ||||| ||||| ||| |||||| || || ||||| |||| Sbjct 2128780 CCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGAA 2128839 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || | |||| || | ||||||||||||||| || | || || ||||| | || Sbjct 2128840 AGGGTTCTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGA 2128899 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||||||| ||| || |||| | | | |||||| || || || Sbjct 2128900 ATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACT 2128959 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || | || ||||| || || |||| ||||| || || ||||||||||| Sbjct 2128960 TCCAAGGTAATGGTCTTACCTGTTAAAGTCTTGACGAAAATTTGCATTTT 2129009 >seq2 Length=2390349 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | || ||||| || | ||| || |||||||| ||||| |||| Sbjct 2170374 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAA 2170433 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| | |||| || | |||||||||||||| || | || || ||||| | || Sbjct 2170434 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGA 2170493 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | | |||||||| ||| || |||| ||| | | | ||||| || || || Sbjct 2170494 ATACCTTCCTTGTCTTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCAGAGGACTCGAC 2170552 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | ||||| || || || |||| ||||| || |||||||||||| Sbjct 2170553 TTCAAGAGTGATAGTCTTACCTGTTAATGTCTTAACGAAGATTTGCATT 2170601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817507079640