Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq4 120 3e-22 >seq4 Length=2182181 Score = 120 bits (132), Expect = 3e-22 Identities = 542/851 (64%), Gaps = 15/851 (2%) Strand=Plus/Minus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||||| |||||||| || ||||| || || || || | || || || ||| Sbjct 398239 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAGATGTTT 398180 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063 ||||| || || || || || | ||| || | | ||||| | | |||| Sbjct 398179 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTACCCAAAGCAATCAAT 398120 Query 16064 AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 16123 ||||| || || || ||||| | || || ||| || || |||||| || | || Sbjct 398119 AATCTGTCGGCAACGAATTCGACGTATTGGCACATCAACTCGGCGTTCATACCCAACAAG 398060 Query 16124 TTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATA 16183 || || | || || || || || | || || || || || || ||| |||| || Sbjct 398059 GAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCAATCTTGACGGCCTCAGTGATGATC 398000 Query 16184 TCTCTTACTACACTATTTAACGGAGG---GTTTAATAAGTGTTTAAACATTATACAAGCA 16240 | ||| | ||| || | || |||| ||||| || | | ||| || Sbjct 397999 T-TCTCA--ACAATAACTGGGTCTGGTCTGTTTTGCAAGTGGGAGAATAACAAACAGGCG 397943 Query 16241 AAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGC 16300 || ||| ||||| ||||| || || | || |||||||| || || || | ||||||| Sbjct 397942 AAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTAGAGAAAGTCAAACCTGGC 397883 Query 16301 ATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCT 16360 || | |||| || || | ||| || || | || || |||||| ||||| |||||| Sbjct 397882 ATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAACCACTGAAGAAAATACCT 397823 Query 16361 TCAACTGCGGCAAATGCAACCAATCGCTCACCGTAC--GTTCT-Atttttactttctatc 16417 ||||| || ||||| ||||| |||| |||||| || | || || | | ||| Sbjct 397822 TCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCATCATCA---GAGATC 397766 Query 16418 cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAAT 16477 ||| | |||||||| || || | | | | || ||||| || || || || || Sbjct 397765 CATCTCAAAGCCCAATCAGCCTTCTTTCTGATGCATGGAATGTTGTCAATGGCGTTGAAA 397706 Query 16478 AAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537 | | | ||| || || || ||||| || |||| ||| || | || Sbjct 397705 AGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAACAAAGAGTAAGTCTCG 397646 Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGT 16597 || ||||| || ||||| || || ||||| || || || | ||||| | ||||| Sbjct 397645 GAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGG 397586 Query 16598 ACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657 ||||| | | || | || | ||||| ||||| || || || || || || || Sbjct 397585 ACTTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACGATACCGTCAGAGGCGGCGAAG 397526 Query 16658 AACGCAAGTATGTGTTTAATAAAAtttttttCGTT-ATCTGAAAGTTTT--AACCAGTCA 16714 || || | || | ||| || | | ||||||| | | || || | ||||||| Sbjct 397525 AAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTTAACTTGTGGTTCCAGTCA 397466 Query 16715 GAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTA 16774 | ||| || || |||| ||||| ||||||| || ||||| ||||||| || Sbjct 397465 GTGGTATCCTTACTCAAGTCGATTTCTTCAGCAGTCCAGAAGGAAGCTTCAGCCTTCTTG 397406 Query 16775 TACATTTTCCA 16785 ||||||| ||| Sbjct 397405 TACATTTGCCA 397395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511924841800