Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq4 120 3e-22
>seq4
Length=2182181
Score = 120 bits (132), Expect = 3e-22
Identities = 542/851 (64%), Gaps = 15/851 (2%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || ||||| |||||||| || ||||| || || || || | || || || |||
Sbjct 398239 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAGATGTTT 398180
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063
||||| || || || || || | ||| || | | ||||| | | ||||
Sbjct 398179 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTACCCAAAGCAATCAAT 398120
Query 16064 AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 16123
||||| || || || ||||| | || || ||| || || |||||| || | ||
Sbjct 398119 AATCTGTCGGCAACGAATTCGACGTATTGGCACATCAACTCGGCGTTCATACCCAACAAG 398060
Query 16124 TTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATA 16183
|| || | || || || || || | || || || || || || ||| |||| ||
Sbjct 398059 GAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCAATCTTGACGGCCTCAGTGATGATC 398000
Query 16184 TCTCTTACTACACTATTTAACGGAGG---GTTTAATAAGTGTTTAAACATTATACAAGCA 16240
| ||| | ||| || | || |||| ||||| || | | ||| ||
Sbjct 397999 T-TCTCA--ACAATAACTGGGTCTGGTCTGTTTTGCAAGTGGGAGAATAACAAACAGGCG 397943
Query 16241 AAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGC 16300
|| ||| ||||| ||||| || || | || |||||||| || || || | |||||||
Sbjct 397942 AAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTAGAGAAAGTCAAACCTGGC 397883
Query 16301 ATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCT 16360
|| | |||| || || | ||| || || | || || |||||| ||||| ||||||
Sbjct 397882 ATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAACCACTGAAGAAAATACCT 397823
Query 16361 TCAACTGCGGCAAATGCAACCAATCGCTCACCGTAC--GTTCT-Atttttactttctatc 16417
||||| || ||||| ||||| |||| |||||| || | || || | | |||
Sbjct 397822 TCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCATCATCA---GAGATC 397766
Query 16418 cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAAT 16477
||| | |||||||| || || | | | | || ||||| || || || || ||
Sbjct 397765 CATCTCAAAGCCCAATCAGCCTTCTTTCTGATGCATGGAATGTTGTCAATGGCGTTGAAA 397706
Query 16478 AAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537
| | | ||| || || || ||||| || |||| ||| || | ||
Sbjct 397705 AGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAACAAAGAGTAAGTCTCG 397646
Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGT 16597
|| ||||| || ||||| || || ||||| || || || | ||||| | |||||
Sbjct 397645 GAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGG 397586
Query 16598 ACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657
||||| | | || | || | ||||| ||||| || || || || || || ||
Sbjct 397585 ACTTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACGATACCGTCAGAGGCGGCGAAG 397526
Query 16658 AACGCAAGTATGTGTTTAATAAAAtttttttCGTT-ATCTGAAAGTTTT--AACCAGTCA 16714
|| || | || | ||| || | | ||||||| | | || || | |||||||
Sbjct 397525 AAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTTAACTTGTGGTTCCAGTCA 397466
Query 16715 GAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTA 16774
| ||| || || |||| ||||| ||||||| || ||||| ||||||| ||
Sbjct 397465 GTGGTATCCTTACTCAAGTCGATTTCTTCAGCAGTCCAGAAGGAAGCTTCAGCCTTCTTG 397406
Query 16775 TACATTTTCCA 16785
||||||| |||
Sbjct 397405 TACATTTGCCA 397395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511924841800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |