Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1 105 5e-18 >seq1 Length=3044122 Score = 105 bits (116), Expect = 5e-18 Identities = 209/304 (69%), Gaps = 4/304 (1%) Strand=Plus/Plus Query 20140 GAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGA 20199 |||||||| || || || ||| | | |||||||| | || || ||| ||| Sbjct 1793443 GAAAAAGGCGTGAAAATCTGGGAAGGAAATGGATCTCGTGAGTTCTTGGACAAGT-TGGG 1793501 Query 20200 TTTGACA-ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTT 20258 |||||| | ||| ||| || |||||||| || || || ||||| || ||||||||||| Sbjct 1793502 TTTGACCGAACGTAGAGAAGGTGATTTGGGACCAGTTTACGGATTCCAGTGGAGACATTT 1793561 Query 20259 TGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACA 20318 ||||||||||| || ||||| | || || |||||| | || || || || Sbjct 1793562 CGGAGCTGAATACAAGGATTGTGACACAGACTACACCGGTCAAGGATTTGACCAGTTGCA 1793621 Query 20319 AAATGTTATTAATTTAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCT 20377 | |||| || || | ||||| || |||||| |||||||||||||||| | | ||| | Sbjct 1793622 AGATGTCATCAA-GAAGTTAAAGACAAACCCATACGACAGAAGAATTATCATGTCCGCTT 1793680 Query 20378 GGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTT 20437 |||| | ||| | ||||| || || ||||||||| | | ||||| || | Sbjct 1793681 GGAATCCACCAGACTTTGGAAAGATGGCCTTACCACCATGTCATGTCTTCTGCCAGTTCT 1793740 Query 20438 ACGT 20441 |||| Sbjct 1793741 ACGT 1793744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183936754285