Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq4 125 7e-24 >seq4 Length=2182181 Score = 125 bits (138), Expect = 7e-24 Identities = 472/731 (65%), Gaps = 12/731 (2%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || ||||| ||||| || || |||||||| || ||||| ||| || || ||| Sbjct 398239 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAGATGTTT 398180 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| || || ||||| || || ||| | | || || | ||| | | | | Sbjct 398179 TCCATGAAGTCGAATGGGTTGGT-GACGTTGTAGACCTTCTTGTTACCCAAAGCAATCAA 398121 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 |||||| || |||| ||| || | ||||| |||| || || |||||||| | | Sbjct 398120 TAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAACTCGGCGTTCATACCCAACAA 398061 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 || || | | ||| || ||||||| || || || ||||| | || || Sbjct 398060 GGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCAATCTTGACGGCCTCAGTGATGAT 398001 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTA--AACACGCA 14209 || || ||| | | | | | |||| | || | ||| | |||| || Sbjct 398000 CTTCTCAACAATAAC--TGGGTCTGGTCTGTTTTGCAAGTGGGAGAATAACAAACAGGCG 397943 Query 14210 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 14269 || ||| || | || |||||||| | || | ||||| || || || || |||||| Sbjct 397942 AAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTAGAGAAAGTCAAACCTGGC 397883 Query 14270 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 14329 ||||| |||| || || ||||| || || | |||||| || || ||||| || || Sbjct 397882 ATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAACCACTGAAGAAAATACCT 397823 Query 14330 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCAT 14389 ||||| |||||||| || | ||||| ||| || ||| | || | | | || |||||| Sbjct 397822 TCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCATCATCAGAGATCCAT 397763 Query 14390 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT-TCAATAGCATT--AAAT 14446 | |||||| |||| || ||| | || || | |||| ||||| || || ||| Sbjct 397762 CTCAAAGCCCAATCAGCCTTCTTTCTGAT-GCATGGAATGTTGTCAATGGCGTTGAAAAG 397704 Query 14447 AAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14506 || |||| | || ||| || ||| || ||||| | || || | || Sbjct 397703 GAAGTCAGCTTCCTTAGGGTCCTT--AACGTAAGTGTCAATTAACAAAGAGTAAGTCTCG 397646 Query 14507 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14566 ||||| ||||||||||| || || ||||| || ||||| | ||||||| ||| Sbjct 397645 GAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGG 397586 Query 14567 ACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14626 || || | | || | ||| |||| || || || || ||||| ||| || || || Sbjct 397585 ACTTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACGATACCGTCAGAGGCGGCGAAG 397526 Query 14627 AATGCCAATAT 14637 || ||||| || Sbjct 397525 AAAGCCAAGAT 397515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345521618840