Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq4 230 3e-55 seq5 136 5e-27 >seq4 Length=2182181 Score = 230 bits (254), Expect = 3e-55 Identities = 746/1142 (65%), Gaps = 20/1142 (2%) Strand=Plus/Minus Query 65812 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 65871 ||||||| | || || || | ||| || |||| |||||||| |||||||| || | | Sbjct 350711 ACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCATCCTTGTACAACA 350652 Query 65872 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 65931 |||| |||||||| |||||| |||||| ||| | || || | ||| | | |||||| Sbjct 350651 TGAAAGGAGTACCGGTTTCAGTCTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 350592 Query 65932 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGT--GTATACAATCGTTCGAAC 65987 | | | ||| || ||||| |||||| ||||| || ||||| | || | |||| Sbjct 350591 TGACAGTG--TTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTATA-ACTCCT-CGAAT 350536 Query 65988 TCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCT 66047 ||||| || |||| | ||| || ||| ||| | ||| | | | | ||| || Sbjct 350535 TCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATCA 350476 Query 66048 CCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCT 66107 |||| | | |||| ||||| || | ||| |||||||| | |||| || || ||| Sbjct 350475 CCGTTTTGTTCGACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAGTCT 350416 Query 66108 CTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 66167 |||| ||| ||| || || || ||||||| | | || | ||| | | || || Sbjct 350415 CTGGCTCTGATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCT 350356 Query 66168 TAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCT 66227 ||||| || |||||||| | ||| | | | || || || ||||| || || || || Sbjct 350355 GCGTGCCATGGCTCCAAGTACAAGGCAAAAGCACCTGGACGCTTGTTACCACCTTGGTCA 350296 Query 66228 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCA 66287 | ||||||||| ||||| || | || | | ||||||||||||||| || || |||||| Sbjct 350295 ACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTGGAATAATACCGTTCGAGGTACCA 350236 Query 66288 TTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCC 66347 || || || | || || ||| | | ||| || || ||| | ||| || || Sbjct 350235 TTAGTACCAGCAATGTAAGCACCAGTGGAACGGATGTTGTGAATGTGCAAACCAATACCA 350176 Query 66348 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 66407 || || | || || || || || || || || ||||| || || || || ||| Sbjct 350175 CCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAGGTATCGTAAATACCATCAATAGAG 350116 Query 66408 TCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 66467 || ||| ||||| | || ||||| ||||||||| || || || || || Sbjct 350115 TCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTACCAGCGTTG 350056 Query 66468 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA 66527 || || || |||||| |||| || || | || ||| | | || || | ||||| Sbjct 350055 AACAAAGTTGGAGAACCGTGGGTGAAGAAACGTTGAGACATCAAGTTATAAGATTCAATG 349996 Query 66528 GCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 66586 | || || || || | ||||| || | | || | ||| | || || || || Sbjct 349995 ACCTTCTCAATGTCGTCACCG-TGAATACCAATAGAAACTCTCATGATCAAATGTTGTGG 349937 Query 66587 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 66646 ||||||| ||| |||| ||| | || | ||||||| | || ||||| || ||||| Sbjct 349936 TCTTTCAGCGACCTTGCCGTTGACACGTAAAAGGTAGGATCTCTCTAAAGTCTTGAAACC 349877 Query 66647 AAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA 66704 || |||||||| ||||| || || ||||||| ||| | ||||| | | ||| Sbjct 349876 GAAGTAGTTGTAGTTGAAA--TCACGGTCGTAAACAATGGCAGAGTTCAACTCGTCCGAG 349819 Query 66705 TATTTGTTAACTACATC-CATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTT 66762 | ||| | | ||| ||| | | ||| || || || ||||| || ||| | | Sbjct 349818 TGCTTGAGGATGATATCGTATGTT--TCCTTAGAGATCATAGGAGAGTGCAATCCAGTCT 349761 Query 66763 TAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTT 66822 | || |||| |||| | | || || | ||| | || | || | |||| | Sbjct 349760 TTGGGTTGATGTAGTCGTACAACTCTTTGGACACGGCGGAGTATTGCTTGGTGGTTTGCT 349701 Query 66823 TGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAG 66882 |||| | || || || || ||||||||||| | |||||| || ||||| || |||| Sbjct 349700 TGTGCAAGTTGGAAACAGCGATTCTAGCGGCGAGAATGGCGTAGTCCGGGTGAATGGTAG 349641 Query 66883 TACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 66941 | || || ||| || | || || |||| ||||||| || | || || || |||| | Sbjct 349640 T-CATGTAGGCGGCAGTCTCAGCAGCCAAGTTGTCCAACTCGATGGTGGTGACACCATGA 349582 Query 66942 TA 66943 || Sbjct 349581 TA 349580 Score = 178 bits (196), Expect = 2e-39 Identities = 584/902 (65%), Gaps = 28/902 (3%) Strand=Plus/Minus Query 35854 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 35913 |||||| || |||||||| |||| || | || ||||| || || || ||||| | Sbjct 398252 CATAACACCAGCCTTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTGGTCTTACCAGC 398193 Query 35914 TAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCC 35973 || || || ||||||||||| |||||||| ||| | || || || | || || || Sbjct 398192 CAAAGAGATGTTTTCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTACC 398133 Query 35974 CAATTCAGAAATCAAT---CTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACA 36030 ||| || ||||||| || || || || ||||| | ||| ||||| || Sbjct 398132 CAA---AGCAATCAATAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAACTCGGC 398076 Query 36031 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 36090 ||||| || | | ||||| | ||| | || | |||||||| ||||| ||| Sbjct 398075 GTTCATACCCAACAAGGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCAATCTTGAC 398016 Query 36091 CGCGTCTGTTATAAT------AGATATTACTGTTTCTTCACTCGGTGGATACAATAAATG 36144 || || || || || | || |||| ||| || | | || || Sbjct 398015 GGCCTCAGTGATGATCTTCTCAACAATAACTGGGTCTGGTCTGTTTTGC------AAGTG 397962 Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204 || | |||||| ||||| || ||| | ||| || ||||| | || || ||||| Sbjct 397961 GGAGAATAACAAACAGGCGAAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTT 397902 Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264 || || || | || ||||| | || | ||| || | ||| || ||||| || || || Sbjct 397901 AGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGA 397842 Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 36324 ||| |||||||| ||||| || || ||||| |||| | ||| || || | ||| Sbjct 397841 ACCACTGAAGAAAATACCTTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGC 397782 Query 36325 ACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 36381 |||| ||||| | ||||||||| ||||||||| | | || || || | Sbjct 397781 CTCATCATCAGAGATCCATCTCAAAGCCCAATCAGCCTTCTTTCTGATGCATGGAATGTT 397722 Query 36382 CTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAA 36441 || || || || || || ||| ||| ||| || ||||| || || ||||| || Sbjct 397721 GTCAATGGCGTTGAAAAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAA 397662 Query 36442 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCT 36501 | | || | || || ||||||||||| || ||||| || ||||||||||| | Sbjct 397661 CAAAGAGTAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTT 397602 Query 36502 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATT 36559 || || | || || ||||| | | | || ||||| | || || || || || || Sbjct 397601 GGCTTCTGGGATTTGGACTTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACGATA 397544 Query 36560 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGTGT 36618 |||||| ||| || || || ||||| | | | || || ||| ||||||| | || | Sbjct 397543 CCGTCAGAGGCGGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTT 397484 Query 36619 TAGT--TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 36676 | | | ||||| ||| || |||| ||| | || | |||||| | ||||| || Sbjct 397483 AACTTGTGGTTCCAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCAGCAGTCCAGAAG 397424 Query 36677 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736 || || || ||||| || ||||| | ||||| || || || | ||||| || | ||| Sbjct 397423 GAAGCTTCAGCCTTCTTGTACATTTGCCAGACTTCGTGGTACTTGATTGGGAAGAGAACG 397364 Query 36737 AA 36738 || Sbjct 397363 AA 397362 >seq5 Length=1741095 Score = 136 bits (150), Expect = 5e-27 Identities = 795/1250 (64%), Gaps = 71/1250 (6%) Strand=Plus/Plus Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 65531 ||||||| ||| |||||||||||||||| |||| | | ||| || ||| | |||| Sbjct 323480 GCACCGTGATATATGGTTTCGAAGATCTGGATATTCAAAACTTTAGCCTCCTCGGAATCA 323539 Query 65532 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 65591 ||||| | | || | |||| ||| || || ||||| || || | | | |||||| Sbjct 323540 AATGGCAATCTCAATTCTAGAAACAAGTCAGCCAACCCTTGTACTCCCAAAGCTATAGGT 323599 Query 65592 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 65651 |||||||||||||| ||||| |||| | || || ||||| | | | ||||| | Sbjct 323600 CTATGTCTCTTATTTGAGATCTCAGTTCCTTCGATCGGATATTTTGTGACGTCTATTACC 323659 Query 65652 TTATTGAGATT--TC-TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT 65708 ||||| | ||| || ||| || | | ||| | ||| | | ||| || || ||| Sbjct 323660 TTATTCAAATTCTTCGTGAGAACTTTTGTGATCG-ATCTT--AATTTCTCGAAGTCGAAT 323716 Query 65709 CGCT---CATCT-----ATT-------------------ACAAAC-ATGTTCAATGCAAC 65740 | | ||| ||| | ||| ||| | ||||| | Sbjct 323717 TGTAAGACTTCTTCGGCATTCGAGGTAGATACCGACTTAATAAAGGATGGT-AATGCTAA 323775 Query 65741 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 65800 ||| | | ||||||||| ||| ||| | | || ||| | | ||||| || Sbjct 323776 GGATCCTAAATTACAAACTGCTGTCTCCTCTGGTGACGAATACTCCACAATCTCGCAACA 323835 Query 65801 -AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 65859 ||| || | ||||||| ||||| || ||||||| || ||||| |||| Sbjct 323836 TAAGTTTGATG-ACTTGATTACACCTAAGTTGCTTTGATTAGATTTCAAATTACAAGCAT 323894 Query 65860 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 65919 | || || | || ||||| ||| ||||| | || ||||||| || || | ||| | Sbjct 323895 CTTTGTATAACATATATGGACCACCTGTTTCTGTTTGTGATTCTAAGATTGCATGCCACA 323954 Query 65920 CGACTCGAGCCTTTATTA-TAGATTTGTATCTCTTTTCTC--TTTCGTATAGTGTATACA 65976 | |||| |||| || | ||| || || || ||| | |||||| || |||||| Sbjct 323955 ACTTTTGAGCTTTTACTACTTGATGTG---CTTTTCCCTCGATCTCGTATCGTTTATACA 324011 Query 65977 ATCGTTCGAACTCGTCTCCCCAAACATTGTCC-AATCCAGGACATTCATCCGGACACATC 66035 || | || || ||||| | || | | | ||||| ||| |||||| ||| | | | Sbjct 324012 ATTTAACAAATTCTTCTCCGTAG-CAGTCTGCTAATCCGGGAGCTTCATCTGGAGAAAAC 324070 Query 66036 AACGACCACTCTCCGTCATCCTTC--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 66093 || ||||| ||| | | | ||| |||| | ||| || | ||| |||||||| | Sbjct 324071 AAAGACCAGTCTTCATTGT--TTCGTACTCTCTCCATGAACAAATCGGGAATCCATAACC 324128 Query 66094 CTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 66153 | | ||| || |||| || || | || || || || ||||| || | || | | Sbjct 324129 CAAAAAACAAGTCTCGTGTCCTGAGCTCTTCCTTGCCGTGGTTCTTCTTCAAGTCTAAAA 324188 Query 66154 ACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 66213 | | | | |||| |||||| |||||||| ||||| || | | || || | ||| | Sbjct 324189 TCTCGAATACATCAGCATGCCATGGTTCCAAATATATAGCAAAGGCCCCTGGTCTTTTAT 324248 Query 66214 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 66273 ||||||||||||| | ||||||||| || | || | ||| | | ||| |||| | || Sbjct 324249 TTCCTCCCTGATCCACGTATCTAGCTGTATCGTTGAAGACTTTAAGCATAGGAACCAAAC 324308 Query 66274 CATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTG 66333 || | | || |||||||| | || || | | |||| | | | ||||| | Sbjct 324309 CACTTGCCGTTCCATTGGTACTGGCTATGTGGGCTCCATGTCCTCTTATATTGTGGACAT 324368 Query 66334 ATAGACCTATTCCCCC---TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCAT 66390 ||| || ||||| || |||| || || ||||| || | | |||||| | | Sbjct 324369 GTAGGCCAATTCCTCCGGATGCC---TTTGAAATTAAAGCTGTTTTATGTAACGTCTTGT 324425 Query 66391 AGATGCCCTCTAT--ACT-ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 66447 ||||||| || || | | || ||||| || | | || ||| || |||| | || Sbjct 324426 AGATGCCGTCGATGGAGTCGTCTTCCAT--TGCT-ATTAAAAAGCATGATGACAAGTAGT 324482 Query 66448 GACGACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 66506 | ||| ||||| ||||| | |||||||| || ||||| |||| | || | ||| Sbjct 324483 TA-TACTCCGTTCCAGCATTGTACAAGGTAGGGGACGCGTGAATAAAGTACTTATTAGAC 324541 Query 66507 AGTAGATTGTACGTCTCAATAGCTGAGTCTA---TATC-CCATTGATGAATTCCTACTGC 66562 | || | ||||||||| | | | || | |||| |||| |||| || | || Sbjct 324542 ATTAACTCGTACGTCTCGACAACATCTTCCATGTTATCTCCATGGATG----CCAATCGC 324597 Query 66563 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 66622 || | | ||||||| ||||| ||||| | ||||| | | ||||| || || Sbjct 324598 AACCCTTAGAAACATGTATTGAGGGGTTTCAGCTATCTTTCCATCAACCTTCAATAAATA 324657 Query 66623 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 66672 ||||| ||||| || || | ||||||||| | || ||| |||| || Sbjct 324658 AGATTTCTCCAATGTCTTGATTCCAAAATAGGTTAATTCAAAATCTCTTT 324707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172693046920