Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq4 118 1e-21 >seq4 Length=2182181 Score = 118 bits (130), Expect = 1e-21 Identities = 369/566 (65%), Gaps = 9/566 (2%) Strand=Plus/Minus Query 13869 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13928 ||||| || || ||| || | || |||||||| | || | ||||| || || || Sbjct 397951 AAACAGGCGAAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTAGAGAAAGTC 397892 Query 13929 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAG 13988 || ||||||||||| |||| || || ||||| || || | ||| || || || ||| Sbjct 397891 AAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAACCACTGAAG 397832 Query 13989 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTC 14048 || || || ||||| |||||||| || | ||||| ||| || ||| | || | | | Sbjct 397831 AAAATACCTTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCATCATCA 397772 Query 14049 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT-TCAATAGC 14107 || |||||| | |||||| |||| || ||| | || || | |||| ||||| || Sbjct 397771 GAGATCCATCTCAAAGCCCAATCAGCCTTCTTTCTGAT-GCATGGAATGTTGTCAATGGC 397713 Query 14108 ATTAAATAAATATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14165 || || | | || |||| | || ||| || ||| || ||||| | || Sbjct 397712 GTTGAAAAGGAAGTCAGCTTCCTTAGGGTCCTT--AACGTAAGTGTCAATTAACAAAGAG 397655 Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225 || | || ||||| ||||||||||| || || ||||| || || || | ||||| Sbjct 397654 TAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCT 397595 Query 14226 GACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285 | ||| ||||| | | || | ||| |||| || || || || ||||| ||| Sbjct 397594 GGGATTTGGACTTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACGATACCGTCAGAG 397535 Query 14286 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTT---T 14342 || || || || ||||| || ||| |||||| || | ||||| | || Sbjct 397534 GCGGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTTAACTTGTGG 397475 Query 14343 TTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14402 ||||| || | ||||||| | || | ||| ||| | ||||| || ||| || Sbjct 397474 TTCCAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCAGCAGTCCAGAAGGAAGCTTCA 397415 Query 14403 GCTTTTTTATACATTACCCATATTTC 14428 || || || |||||| ||| | ||| Sbjct 397414 GCCTTCTTGTACATTTGCCAGACTTC 397389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727922044200