Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4 122 8e-23 >seq4 Length=2182181 Score = 122 bits (134), Expect = 8e-23 Identities = 547/857 (64%), Gaps = 15/857 (2%) Strand=Plus/Minus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || ||||| ||||| || || || ||||| || ||||| ||| || || ||| Sbjct 398239 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAGATGTTT 398180 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAA 13487 ||||| || |||||||| || || ||| | | || || | ||| | | | || Sbjct 398179 TCCATGAAGTCGAATGGGTTGGT-GACGTTGTAGACCTTCTTGTTACCCAAAGCAATCAA 398121 Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547 |||||| || |||| || || | ||||| |||| || || |||||||| | | Sbjct 398120 TAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAACTCGGCGTTCATACCCAACAA 398061 Query 13548 TTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607 || || | | || || ||||||| || || || ||||| | || || Sbjct 398060 GGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCAATCTTGACGGCCTCAGTGATGAT 398001 Query 13608 AATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTA--AACACGCA 13665 ||| || ||| | | | | | |||| | || | ||| | |||| || Sbjct 398000 CTTCTCAACAATAAC--TGGGTCTGGTCTGTTTTGCAAGTGGGAGAATAACAAACAGGCG 397943 Query 13666 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13725 || ||| || | || |||||||| | || | ||||| || || || || |||||| Sbjct 397942 AAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTAGAGAAAGTCAAACCTGGC 397883 Query 13726 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 13785 ||||| |||| || || ||||| || || | |||||| || || ||||| || || Sbjct 397882 ATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAACCACTGAAGAAAATACCT 397823 Query 13786 TCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCAT 13845 ||||| |||||||| || | || || ||| || ||| | || | | | || |||||| Sbjct 397822 TCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCATCATCAGAGATCCAT 397763 Query 13846 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT-TCGATTGCATTGAATA- 13903 | |||||| |||| || ||| | || || | |||| || || || ||||| | Sbjct 397762 CTCAAAGCCCAATCAGCCTTCTTTCTGAT-GCATGGAATGTTGTCAATGGCGTTGAAAAG 397704 Query 13904 -AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 13962 || |||| | || ||| || ||| || ||||| | || || | || Sbjct 397703 GAAGTCAGCTTCCTTAGGGTCCTT--AACGTAAGTGTCAATTAACAAAGAGTAAGTCTCG 397646 Query 13963 GAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14022 ||||| |||||||| || || || ||||| || ||||| | ||||||| ||| Sbjct 397645 GAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGG 397586 Query 14023 ACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAA 14082 || || | | || | || ||||||| || || || ||||| ||| || || || Sbjct 397585 ACTTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACGATACCGTCAGAGGCGGCGAAG 397526 Query 14083 AATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTT---TTTCCAATCG 14139 || ||||| || ||| |||||| || | ||||| | || ||||| || Sbjct 397525 AAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTTAACTTGTGGTTCCAGTCA 397466 Query 14140 GCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTA 14199 | ||||||| | || | ||| ||| | ||||| || ||| |||| || || Sbjct 397465 GTGGTATCCTTACTCAAGTCGATTTCTTCAGCAGTCCAGAAGGAAGCTTCAGCCTTCTTG 397406 Query 14200 TACATTACCCATATTTC 14216 |||||| ||| | ||| Sbjct 397405 TACATTTGCCAGACTTC 397389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588722229320