Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4 217 2e-51 seq5 154 2e-32 >seq4 Length=2182181 Score = 217 bits (240), Expect = 2e-51 Identities = 742/1141 (65%), Gaps = 18/1141 (2%) Strand=Plus/Minus Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833 ||||||| | || || || | ||| || |||| |||||||| |||||||| || | | Sbjct 350711 ACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCATCCTTGTACAACA 350652 Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893 | || |||||||| |||||| |||||| ||| | || || | ||| | | |||||| Sbjct 350651 TGAAAGGAGTACCGGTTTCAGTCTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 350592 Query 71894 TTATTATATTCTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTC 71951 | | | || | || ||||| |||||| ||||| || ||||| ||||| || Sbjct 350591 TGACAGTGTT--TCTACCTCTTCCTTCTCTCTCGTAACGTTCGTATAACTCCTCGAATTC 350534 Query 71952 GTCTCCCCAAGCAT-TGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTC 72010 ||| || || | | || | || || ||| ||| || ||| | | | | ||| || | Sbjct 350533 GTCACCGTAAACTTCTGGC-AAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATCAC 350475 Query 72011 CATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 72070 | | | | |||| ||||| || | ||| |||||||| | |||| || | |||| Sbjct 350474 CGTTTTGTTCGACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAGTCTC 350415 Query 72071 TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 72130 ||| ||| || || || || ||||||| | | || | ||| | | || || | Sbjct 350414 TGGCTCTGATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCTG 350355 Query 72131 AATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTA 72190 ||||| || |||||||| | ||| | | | || || || ||||| || || || || | Sbjct 350354 CGTGCCATGGCTCCAAGTACAAGGCAAAAGCACCTGGACGCTTGTTACCACCTTGGTCAA 350295 Query 72191 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCAT 72250 ||||||||| ||||| || | || | | ||||||||||||||| || || | ||||| Sbjct 350294 CGTATCTAGCAGTGTTGTTGAAGACACGAACCATTGGAATAATACCGTTCGAGGTACCAT 350235 Query 72251 TGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCC 72310 | || || | || || ||| ||| ||| || ||| ||| | ||| || || | Sbjct 350234 TAGTACCAGCAATGTAAGCACCAGTGGAACGGATGTTGTGAATGTGCAAACCAATACCAC 350175 Query 72311 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 72370 | || | || || || || || || || || ||||| || || || || ||| | Sbjct 350174 CAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAGGTATCGTAAATACCATCAATAGAGT 350115 Query 72371 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 72430 | ||| ||||| | || ||||| ||||||||| || || || || || | Sbjct 350114 CGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTACCAGCGTTGA 350055 Query 72431 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAG 72490 | || || |||||| |||| || || | || ||||| | || || | ||||| Sbjct 350054 ACAAAGTTGGAGAACCGTGGGTGAAGAAACGTTGAGACATCAAGTTATAAGATTCAATGA 349995 Query 72491 CTGATTCTATATC-CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGT 72549 | || || || || | || || || | | || | ||| | || ||| || ||| Sbjct 349994 CCTTCTCAATGTCGTCACCG-TGAATACCAATAGAAACTCTCATGATCAAATGTTGTGGT 349936 Query 72550 CTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 72609 |||||| ||| |||| || | || | ||||||| | || ||||| || ||||| Sbjct 349935 CTTTCAGCGACCTTGCCGTTGACACGTAAAAGGTAGGATCTCTCTAAAGTCTTGAAACCG 349876 Query 72610 AAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTAT 72667 || |||||||| ||||| || || ||||||| ||| | || || | | ||| | Sbjct 349875 AAGTAGTTGTAGTTGAAA--TCACGGTCGTAAACAATGGCAGAGTTCAACTCGTCCGAGT 349818 Query 72668 ATTTGTTAACTATATC-CATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTT 72725 ||| | ||||| ||| | | ||| || || || ||||| || ||| | || Sbjct 349817 GCTTGAGGATGATATCGTATGTT--TCCTTAGAGATCATAGGAGAGTGCAATCCAGTCTT 349760 Query 72726 AGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTT 72785 || || | |||| | | || || | ||| | || | || | |||| ||| Sbjct 349759 TGGGTTGATGTAGTCGTACAACTCTTTGGACACGGCGGAGTATTGCTTGGTGGTTTGCTT 349700 Query 72786 GTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGT 72845 ||| | || || || || ||||| ||||| |||||||| || || || || ||||| Sbjct 349699 GTGCAAGTTGGAAACAGCGATTCTAGCGGCGAGAATGGCGTAGTCCGGGTGAATGGTAGT 349640 Query 72846 ACAAGT-GGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTAT 72904 || || ||| || | || || |||| ||||||| || | || || || |||| || Sbjct 349639 -CATGTAGGCGGCAGTCTCAGCAGCCAAGTTGTCCAACTCGATGGTGGTGACACCATGAT 349581 Query 72905 A 72905 | Sbjct 349580 A 349580 Score = 185 bits (204), Expect = 1e-41 Identities = 583/899 (65%), Gaps = 22/899 (2%) Strand=Plus/Minus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 |||||| || |||||||| |||| || | || ||||| || || ||||| || | Sbjct 398252 CATAACACCAGCCTTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTGGTCTTACCAGC 398193 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 ||| || || ||||||||||| || || || ||||| || || || | || || || Sbjct 398192 CAAAGAGATGTTTTCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTACC 398133 Query 41881 CAATTCAGAAATCAAT---CTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACA 41937 ||| || ||||||| || || || | |||||| | ||| ||||| || Sbjct 398132 CAA---AGCAATCAATAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAACTCGGC 398076 Query 41938 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 41997 ||||| || | | ||||| | ||| | || | |||||||| ||||| ||| Sbjct 398075 GTTCATACCCAACAAGGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCAATCTTGAC 398016 Query 41998 CGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT-----AAATGT 42052 || || || || |||||| || | ||| ||| | | || || Sbjct 398015 GGCCTCAGTGAT----GATCTT-CTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGG 397961 Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112 || | |||||| ||||| || ||||| ||| |||||||| | || || ||||| Sbjct 397960 GAGAATAACAAACAGGCGAAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTA 397901 Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172 || || || | || ||||| | || | ||| || | ||| || || || || || || Sbjct 397900 GAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAA 397841 Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232 ||| ||||| || ||||| || || ||||| |||| | ||| || || | ||| Sbjct 397840 CCACTGAAGAAAATACCTTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCC 397781 Query 42233 CTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 42289 |||| ||||| | ||||||||| ||||||||| | | || || || | Sbjct 397780 TCATCATCAGAGATCCATCTCAAAGCCCAATCAGCCTTCTTTCTGATGCATGGAATGTTG 397721 Query 42290 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAA 42349 || ||||| || || || ||| ||| ||| || ||||| || || || || || Sbjct 397720 TCAATGGCGTTGAAAAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAAC 397661 Query 42350 AGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTG 42409 | | || | || || ||||||||||| || || || || ||||||||||| || Sbjct 397660 AAAGAGTAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTG 397601 Query 42410 GCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCG 42469 || || | | || ||||| | | | || || | || || ||||| || || ||| Sbjct 397600 GCTTCTGGGATTTGGACTTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACGATACCG 397541 Query 42470 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT 42529 ||| ||| || || || ||||| | | | || || ||| |||||| | |||| Sbjct 397540 TCAGAGGCGGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTTAAC 397481 Query 42530 TT---ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGAT 42586 || ||||| ||| || |||| ||| | || | |||||| | ||||| || || Sbjct 397480 TTGTGGTTCCAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCAGCAGTCCAGAAGGAA 397421 Query 42587 GCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 ||||| ||||| || ||||| | ||||| || || || | |||||||| | ||| || Sbjct 397420 GCTTCAGCCTTCTTGTACATTTGCCAGACTTCGTGGTACTTGATTGGGAAGAGAACGAA 397362 >seq5 Length=1741095 Score = 154 bits (170), Expect = 2e-32 Identities = 571/878 (65%), Gaps = 34/878 (4%) Strand=Plus/Plus Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833 ||||||| ||||| || ||||||| || ||||| ||||| || || | | Sbjct 323847 ACTTGATTACACCTAAGTTGCTTTGATTAGATTTCAAATTACAAGCATCTTTGTATAACA 323906 Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893 || | ||| ||| ||||| | || ||||||| || || | ||| | | |||| | Sbjct 323907 TATATGGACCACCTGTTTCTGTTTGTGATTCTAAGATTGCATGCCACAACTTTTGAGCTT 323966 Query 71894 TTATTATATTCTTGTATCT-CTTTTCTCTT----TCGTATTGTGTATATAATCGTTCGAA 71948 ||| || |||| || | |||||| || |||||| || |||| ||| | || Sbjct 323967 TTACTA----CTTG-ATGTGCTTTTCCCTCGATCTCGTATCGTTTATACAATTTAACAAA 324021 Query 71949 CTCGTCTCCCCAAGCATTGT-CTAATCCAGGACATTCATTCGGACACATCAATGACCACT 72007 || ||||| | ||| | | ||||||| ||| ||||| ||| | | ||| ||||| | Sbjct 324022 TTCTTCTCCGTA-GCAGTCTGCTAATCCGGGAGCTTCATCTGGAGAAAACAAAGACCAGT 324080 Query 72008 CTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 72067 || ||| | ||||| | ||| || | ||| |||||||| | | | ||| | | Sbjct 324081 CTTCATTGTTTCGTACTCTCTCCATGAACAAATCGGGAATCCATAACCCAAAAAACAAGT 324140 Query 72068 CTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 72127 ||| || || |||| || || || ||||| || | || | | | | | | || Sbjct 324141 CTCGTGTCCTGAGCTCTTCCTTGCCGTGGTTCTTCTTCAAGTCTAAAATCTCGAATACAT 324200 Query 72128 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGAT 72187 ||| |||||| |||||||| ||||| || | | || || | ||| ||||||||||||| Sbjct 324201 CAGCATGCCATGGTTCCAAATATATAGCAAAGGCCCCTGGTCTTTTATTTCCTCCCTGAT 324260 Query 72188 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCAC 72247 | | ||||||||| || | || | ||| | | ||| |||| | |||| | | | | Sbjct 324261 CCACGTATCTAGCTGTATCGTTGAAGACTTTAAGCATAGGAACCAAACCACTTGCCGTTC 324320 Query 72248 CATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTC 72307 ||||||| | || || | | |||| | | |||||| | ||| || |||| Sbjct 324321 CATTGGTACTGGCTATGTGGGCTCCATGTCCTCTTATATTGTGGACATGTAGGCCAATTC 324380 Query 72308 CCCC---TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 72364 | || |||| || || ||||| || | | |||||| | |||||||| || | Sbjct 324381 CTCCGGATGCC---TTTGAAATTAAAGCTGTTTTATGTAACGTCTTGTAGATGCCGTCGA 324437 Query 72365 T--ACT-ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT-AGTT 72420 | | | || ||||| || | | || ||| || |||| | || | ||| ||| Sbjct 324438 TGGAGTCGTCTTCCAT--TGCT-ATTAAAAAGCATGATGACAAGTAGTTA-TACTCCGTT 324493 Query 72421 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 72480 || ||||| | |||||||| || ||||| |||| | || | ||||| || | |||| Sbjct 324494 CCAGCATTGTACAAGGTAGGGGACGCGTGAATAAAGTACTTATTAGACATTAACTCGTAC 324553 Query 72481 GTCTCAATAGCTGATTCTA---TATC-CCATTGATGTATTCCTACCGCGACACGCATTAA 72536 ||||| | | | ||| | |||| |||| |||| || | ||| || | | || Sbjct 324554 GTCTCGACAACATCTTCCATGTTATCTCCATGGATG----CCAATCGCAACCCTTAGAAA 324609 Query 72537 CATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAA 72596 ||| | ||||| ||||| | ||||| || | ||||| || || ||||| ||||| Sbjct 324610 CATGTATTGAGGGGTTTCAGCTATCTTTCCATCAACCTTCAATAAATAAGATTTCTCCAA 324669 Query 72597 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 72634 || || | ||||||||| | || ||| |||| || Sbjct 324670 TGTCTTGATTCCAAAATAGGTTAATTCAAAATCTCTTT 324707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139090939880