Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq4 105 6e-18 >seq4 Length=2182181 Score = 105 bits (116), Expect = 6e-18 Identities = 361/557 (65%), Gaps = 13/557 (2%) Strand=Plus/Minus Query 13147 CATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGT 13206 || ||| || || ||| |||||| ||||||||||| | || | |||||| || || || Sbjct 397952 CAAACAGGCGAAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTAGAGAAAGT 397893 Query 13207 TAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAAC--CCGaa 13264 | ||| ||||| | |||| || || | ||| || || | ||| || |||| | ||| Sbjct 397892 CAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAACCACTGAA 397833 Query 13265 aaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACC--ATACGTACT-ATTT 13321 |||||| |||||||| || ||||| || | || |||||||| | | | || || Sbjct 397832 GAAAATA--CCTTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCATCA 397775 Query 13322 TTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCT 13381 | | ||||| | ||||| | || || | | | | ||| || || || Sbjct 397774 TCA---GAGATCCATCTCAAAGCCCAATCAGCCTTCTTTCTGATGCATGGAATGTTGTCA 397718 Query 13382 ATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAG 13441 || ||||| || | | | ||||||| ||| || ||||| || || || || Sbjct 397717 ATGGCGTTGAAAAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAACAAA 397658 Query 13442 CTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCC 13501 || | || || ||||| ||||||||| ||||||||||| || ||||| | || Sbjct 397657 GAGTAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCT 397598 Query 13502 TCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCA 13561 |||| | || ||||||| | || | || | ||||| ||||| || || |||||| Sbjct 397597 TCTGGGATTTGGACTTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACGATACCGTCA 397538 Query 13562 CTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTT- 13620 || || || ||||| | || | ||| || | | ||||||| | ||||| Sbjct 397537 GAGGCGGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTTAACTTG 397478 Query 13621 --TAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCA 13678 ||| || | ||| || || || | || ||| | ||||| || ||||| Sbjct 397477 TGGTTCCAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCAGCAGTCCAGAAGGAAGCT 397418 Query 13679 ACAGCCTTCTTATACAT 13695 |||||||||| ||||| Sbjct 397417 TCAGCCTTCTTGTACAT 397401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982331716226