Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 5e-12 >seq2 Length=2390349 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/220 (69%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 48509 AACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGC 48568 || ||||| || || ||||| ||| || |||||||||||||| |||| | || Sbjct 2169927 AATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTA 2169986 Query 48569 TCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCC 48628 |||| |||| |||||||| || | ||||||||||| || || || | || |||| Sbjct 2169987 CCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCAGGTGGAATACCTTCC 2170046 Query 48629 TTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTG 48686 ||||| || || ||| | | | || || || || | |||||| ||||| | Sbjct 2170047 TTGTCTTGGATCTTAGACTTAACGTTGTCG--ATAGTGTCAGAAGACTCAACCTCGAGGG 2170104 Query 48687 TTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | ||||| ||||| || | ||| || || ||||| ||||| Sbjct 2170105 TGATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251133258013