Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq2 86.0 5e-12
>seq2
Length=2390349
Score = 86.0 bits (94), Expect = 5e-12
Identities = 152/220 (69%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 48509 AACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGC 48568
|| ||||| || || ||||| ||| || |||||||||||||| |||| | ||
Sbjct 2169927 AATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTA 2169986
Query 48569 TCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCC 48628
|||| |||| |||||||| || | ||||||||||| || || || | || ||||
Sbjct 2169987 CCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCAGGTGGAATACCTTCC 2170046
Query 48629 TTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTG 48686
||||| || || ||| | | | || || || || | |||||| ||||| |
Sbjct 2170047 TTGTCTTGGATCTTAGACTTAACGTTGTCG--ATAGTGTCAGAAGACTCAACCTCGAGGG 2170104
Query 48687 TTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| ||||| ||||| || | ||| || || ||||| |||||
Sbjct 2170105 TGATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251133258013
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |