Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2 131 2e-25 seq4 96.9 3e-15 >seq2 Length=2390349 Score = 131 bits (144), Expect = 2e-25 Identities = 173/240 (72%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| |||| || |||||||||| ||| |||||||| | ||| ||||||||||| | Sbjct 2169380 AAAAATTTATTGACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGAT 2169439 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| || || | ||| || ||| |||| || || || | ||||| |||||||| Sbjct 2169440 GTTGTAGTCAGAAAGAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTG 2169499 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || || || ||||||||||| ||||| | || || | ||| ||| | ||| |||||| Sbjct 2169500 TTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTC 2169559 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || |||| ||||| || || ||||| | ||| || || || || ||||| Sbjct 2169560 AGAGGACTCAACTTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2169619 Score = 107 bits (118), Expect = 2e-18 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || |||||||||| || |||||||| | ||| ||||||||||| | | Sbjct 2170134 AAAATTTGCATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATG 2170193 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || || || | ||| | || |||| || || || | || || |||||||| Sbjct 2170194 TTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGT 2170253 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || || || ||||||||||| ||||| | || || | ||| ||| | ||| |||||| Sbjct 2170254 TGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCG 2170313 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || | || ||||| || ||||| | ||| || || || || ||||| Sbjct 2170314 GAAGACTCGACTTCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170372 Score = 107 bits (118), Expect = 2e-18 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || |||||||||| || |||||||| | ||| ||||| ||||| | | Sbjct 2170362 AAAATTTGCATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATG 2170421 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || || || | ||| | || |||| || || || | || || |||||||| Sbjct 2170422 TTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGT 2170481 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || || || ||||||||||| ||||| | || || | ||||||| | | | |||||| Sbjct 2170482 TGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCA 2170541 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | ||||| |||| ||||| || || || || | || || || ||||| ||||| Sbjct 2170542 GAGGACTCGACTTCAAGAGTGATAGTCTTACCTGTTAATGTCTTAACGAAGATTTGCAT 2170600 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 94790 AATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTG 94849 |||| || |||||||| | ||| ||||| ||||| | ||| || || | ||| | Sbjct 2169927 AATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTA 2169986 Query 94850 GAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 || |||| || || || | |||||||| | || || || || ||||||||||| Sbjct 2169987 CCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCAGGTGGAATACCTTCC 2170046 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969 ||||| | || || | ||| ||| | ||| |||||||| || || || | ||| Sbjct 2170047 TTGTCTTGGATCTTAGACTTAACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTG 2170106 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || ||||| | ||| || || || || ||||| Sbjct 2170107 ATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170144 >seq4 Length=2182181 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| || ||||||||||| || || ||||| || | ||| || || Sbjct 2128780 CCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAG-- 2128837 Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || ||| | || |||| ||| || || | ||||| |||||||| || || || | Sbjct 2128838 AAAGGGTTCTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTG 2128897 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||||||||| ||||| | || || | |||||| | | | ||||| | | |||| Sbjct 2128898 GAATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGA 2128957 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || ||||| || || || | ||| || || || || ||||| Sbjct 2128958 CTTCCAAGGTAATGGTCTTACCTGTTAAAGTCTTGACGAAAATTTGCAT 2129006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291127152680