Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 131 3e-26 >seq5 Length=1741095 Score = 131 bits (144), Expect = 3e-26 Identities = 181/252 (72%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||| ||||||||||| |||||||||||||||||| | | |||| | Sbjct 701506 AGATCT-TGAGAGACAACATCCAAGGTATCACCAAGCCAGCTATCAGAAGATTGGCCAGA 701448 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| | || | ||| |||| ||||| | | | ||| |||||| Sbjct 701447 AGAGGTGGTGTTAAGCGTATTTCCGCTTTGATCTACGAAGAAGTCAGAGTTGTCTTGAAG 701388 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 |||| | ||| ||| ||| |||||| || |||||| ||||||||||| | ||| Sbjct 701387 TCCTTCTTGGAGAACGTCATCAGAGATGCTGTCACCTATACTGAGCACGCTAAGAGAAAG 701328 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || ||||| || |||| | ||||| || ||||| | ||||| | | | || ||| Sbjct 701327 ACCGTCACTTCTTTGGACGTTGTCTACGCCTTGAAGAGACAAGGAAGAACCTTGTACGGT 701268 Query 16688 TTTGGAAGTTAA 16699 || || ||||| Sbjct 701267 TTCGGTGGTTAA 701256 Score = 113 bits (124), Expect = 7e-21 Identities = 177/252 (70%), Gaps = 1/252 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||| ||||||||||| || ||||||||||| ||| | | |||| | Sbjct 1151171 AGATCT-TAAGAGACAACATCCAAGGTATTACCAAGCCAGCCATCAGAAGATTGGCCAGA 1151229 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| | || | ||| |||| ||||| | | | || |||||| Sbjct 1151230 AGAGGTGGTGTTAAGCGTATTTCCGCTTTGATCTACGAAGAAGTCAGAGTCGTCTTGAAG 1151289 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 |||| | ||| ||| ||| |||||| || || ||||||||||| || | ||| Sbjct 1151290 TCCTTCTTGGAGAACGTCATCAGAGATGCTGTCACTTACACCGAGCACGCCAAGAGAAAG 1151349 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || ||||| || |||| | ||||| || ||||| | ||||| | | | |||||| Sbjct 1151350 ACCGTCACTTCTTTGGACGTTGTCTACGCCTTGAAGAGACAAGGTAGAACCTTGTATGGT 1151409 Query 16688 TTTGGAAGTTAA 16699 || || ||||| Sbjct 1151410 TTCGGTGGTTAA 1151421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075188114009