Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq5 131 3e-26
>seq5
Length=1741095
Score = 131 bits (144), Expect = 3e-26
Identities = 181/252 (72%), Gaps = 1/252 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | |||| ||||||||||| |||||||||||||||||| | | |||| |
Sbjct 701506 AGATCT-TGAGAGACAACATCCAAGGTATCACCAAGCCAGCTATCAGAAGATTGGCCAGA 701448
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || |||||| | || | ||| |||| ||||| | | | ||| ||||||
Sbjct 701447 AGAGGTGGTGTTAAGCGTATTTCCGCTTTGATCTACGAAGAAGTCAGAGTTGTCTTGAAG 701388
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
|||| | ||| ||| ||| |||||| || |||||| ||||||||||| | |||
Sbjct 701387 TCCTTCTTGGAGAACGTCATCAGAGATGCTGTCACCTATACTGAGCACGCTAAGAGAAAG 701328
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| ||||| || |||| | ||||| || ||||| | ||||| | | | || |||
Sbjct 701327 ACCGTCACTTCTTTGGACGTTGTCTACGCCTTGAAGAGACAAGGAAGAACCTTGTACGGT 701268
Query 16688 TTTGGAAGTTAA 16699
|| || |||||
Sbjct 701267 TTCGGTGGTTAA 701256
Score = 113 bits (124), Expect = 7e-21
Identities = 177/252 (70%), Gaps = 1/252 (0%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | |||| ||||||||||| || ||||||||||| ||| | | |||| |
Sbjct 1151171 AGATCT-TAAGAGACAACATCCAAGGTATTACCAAGCCAGCCATCAGAAGATTGGCCAGA 1151229
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || |||||| | || | ||| |||| ||||| | | | || ||||||
Sbjct 1151230 AGAGGTGGTGTTAAGCGTATTTCCGCTTTGATCTACGAAGAAGTCAGAGTCGTCTTGAAG 1151289
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
|||| | ||| ||| ||| |||||| || || ||||||||||| || | |||
Sbjct 1151290 TCCTTCTTGGAGAACGTCATCAGAGATGCTGTCACTTACACCGAGCACGCCAAGAGAAAG 1151349
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| ||||| || |||| | ||||| || ||||| | ||||| | | | ||||||
Sbjct 1151350 ACCGTCACTTCTTTGGACGTTGTCTACGCCTTGAAGAGACAAGGTAGAACCTTGTATGGT 1151409
Query 16688 TTTGGAAGTTAA 16699
|| || |||||
Sbjct 1151410 TTCGGTGGTTAA 1151421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075188114009
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |