Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq4 129 6e-25 >seq4 Length=2182181 Score = 129 bits (142), Expect = 6e-25 Identities = 178/249 (71%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531 |||||| || || ||| |||||||||||||| || | || || || ||||| || || Sbjct 397952 CAAACAGGCGAAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTAGAGAAAGT 397893 Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591 ||||| ||||| || |||||||| || ||||| || || || || || | || || Sbjct 397892 CAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAACCACTGAA 397833 Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651 |||||| || |||||||||||||| |||||||||| ||||||| | | || | ||| Sbjct 397832 GAAAATACCTTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCATCATC 397773 Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGC 21711 | |||||| | ||||| | ||||| | | | || || ||| | ||||| || Sbjct 397772 AGAGATCCATCTCAAAGCCCAATCAGCCTTCTTTCTGATGCATGGAATGTTGTCAATGGC 397713 Query 21712 TTTTAAAAG 21720 || ||||| Sbjct 397712 GTTGAAAAG 397704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900713566120