Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq4 230 3e-55 seq5 131 2e-25 >seq4 Length=2182181 Score = 230 bits (254), Expect = 3e-55 Identities = 746/1142 (65%), Gaps = 20/1142 (2%) Strand=Plus/Minus Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027 ||||||| | || || || | ||| || |||| |||||||| |||||||| || | | Sbjct 350711 ACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCATCCTTGTACAACA 350652 Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087 |||| |||||||| |||||| |||||| ||| | || || | ||| | | |||||| Sbjct 350651 TGAAAGGAGTACCGGTTTCAGTCTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 350592 Query 63088 TTATTATAGATTTGTATCTCCT--TTCTCTTTCGTATAGT--GTATACAATCGTTCGAAC 63143 | | | ||| || ||| | |||||| ||||| || ||||| | || | |||| Sbjct 350591 TGACAGTG--TTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTATA-ACTCCT-CGAAT 350536 Query 63144 TCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCT 63203 ||||| || |||| | ||| || ||| ||| | ||| | | | | ||| || Sbjct 350535 TCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATCA 350476 Query 63204 CCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 63263 |||| | | |||| ||||| || | ||| |||||||| | |||| || | ||| Sbjct 350475 CCGTTTTGTTCGACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAGTCT 350416 Query 63264 CTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 63323 |||| ||| ||| || || || ||||||| | | || | ||| | | || || Sbjct 350415 CTGGCTCTGATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCT 350356 Query 63324 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCT 63383 | ||||| || |||||||| | ||| | | | || || || ||||| || || || || Sbjct 350355 GCGTGCCATGGCTCCAAGTACAAGGCAAAAGCACCTGGACGCTTGTTACCACCTTGGTCA 350296 Query 63384 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCA 63443 | ||||||||| ||||| || | || | | |||||||||||||||||| || ||||| Sbjct 350295 ACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTGGAATAATACCGTTCGAGGTACCA 350236 Query 63444 TTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCC 63503 || ||||| | || || ||| ||| ||| || || ||| | ||| || || Sbjct 350235 TTAGTACCAGCAATGTAAGCACCAGTGGAACGGATGTTGTGAATGTGCAAACCAATACCA 350176 Query 63504 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTA 63563 || || | || || || || || || || || || || || ||||| || || Sbjct 350175 CCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAGGTATCGTAAATACCATCAATAGAG 350116 Query 63564 TCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 63623 || || ||||| | || ||||| ||||||||| || || || || || Sbjct 350115 TCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTACCAGCGTTG 350056 Query 63624 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA 63683 || || || |||||| |||| || || | || ||| | | || || | ||||| Sbjct 350055 AACAAAGTTGGAGAACCGTGGGTGAAGAAACGTTGAGACATCAAGTTATAAGATTCAATG 349996 Query 63684 GCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 63742 | || || || || | ||||| || | | || | ||| | || || || || Sbjct 349995 ACCTTCTCAATGTCGTCACCG-TGAATACCAATAGAAACTCTCATGATCAAATGTTGTGG 349937 Query 63743 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 63802 ||||||| ||| |||| ||| | || | ||||||| | || ||||| || ||||| Sbjct 349936 TCTTTCAGCGACCTTGCCGTTGACACGTAAAAGGTAGGATCTCTCTAAAGTCTTGAAACC 349877 Query 63803 AAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA 63860 || |||||||| ||||| || || ||||||| ||| | ||||| | | ||| Sbjct 349876 GAAGTAGTTGTAGTTGAAA--TCACGGTCGTAAACAATGGCAGAGTTCAACTCGTCCGAG 349819 Query 63861 TATTTGTTAACTATATC-CATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTT 63918 | ||| | ||||| ||| | | ||| || || || ||||| || ||| | | Sbjct 349818 TGCTTGAGGATGATATCGTATGTT--TCCTTAGAGATCATAGGAGAGTGCAATCCAGTCT 349761 Query 63919 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 63978 | || || | |||| | | || || | ||| | || | || | |||| || Sbjct 349760 TTGGGTTGATGTAGTCGTACAACTCTTTGGACACGGCGGAGTATTGCTTGGTGGTTTGCT 349701 Query 63979 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAG 64038 |||| | || || || || ||||| ||||| |||||||| || ||||| || |||| Sbjct 349700 TGTGCAAGTTGGAAACAGCGATTCTAGCGGCGAGAATGGCGTAGTCCGGGTGAATGGTAG 349641 Query 64039 TACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 64097 | || || ||| || | || || |||| ||||||| || | || || || |||| | Sbjct 349640 T-CATGTAGGCGGCAGTCTCAGCAGCCAAGTTGTCCAACTCGATGGTGGTGACACCATGA 349582 Query 64098 TA 64099 || Sbjct 349581 TA 349580 Score = 192 bits (212), Expect = 7e-44 Identities = 592/901 (66%), Gaps = 26/901 (3%) Strand=Plus/Minus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 |||||| || |||||||| |||| || | || ||||| || || || || || | Sbjct 398252 CATAACACCAGCCTTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTGGTCTTACCAGC 398193 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119 ||| || || ||||||||||| || || || ||||| || || || | || || || Sbjct 398192 CAAAGAGATGTTTTCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTACC 398133 Query 33120 CAATTCAGAAATCAAT---CTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACA 33176 ||| || ||||||| || || || |||||||| | ||| ||||| || Sbjct 398132 CAA---AGCAATCAATAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAACTCGGC 398076 Query 33177 ATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATAC 33236 ||||| || | | ||||| | ||| | || | |||||||| ||||| || Sbjct 398075 GTTCATACCCAACAAGGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCAATCTTGAC 398016 Query 33237 CGCATCTGTTATAATAGATCT-AACGGTTTCT---TCAC-TCGGTGGATGCAATAAATGT 33291 || || || || || ||| ||| | || || || || ||||| || Sbjct 398015 GGCCTCAGTGATGATCT-TCTCAACAATAACTGGGTCTGGTCTGTTT-TGCAAG---TGG 397961 Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351 || | |||||| ||||| || ||||| ||| || ||||| | || | ||||| Sbjct 397960 GAGAATAACAAACAGGCGAAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTA 397901 Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411 || || || | || ||||| | || | ||| || | ||| || ||||||||||| || Sbjct 397900 GAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAA 397841 Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33471 ||| ||||| || ||||| || |||||||| |||| | ||| || || | ||| Sbjct 397840 CCACTGAAGAAAATACCTTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCC 397781 Query 33472 CTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 33528 |||| ||||| | ||||||||| ||||||||| | | || || || | Sbjct 397780 TCATCATCAGAGATCCATCTCAAAGCCCAATCAGCCTTCTTTCTGATGCATGGAATGTTG 397721 Query 33529 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 33588 || ||||| || || || ||| ||| ||| || ||||| ||||| || || || Sbjct 397720 TCAATGGCGTTGAAAAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAAC 397661 Query 33589 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 33648 | | || | || || ||||||||||| || || || || ||||||||||| | Sbjct 397660 AAAGAGTAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTG 397601 Query 33649 GCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC-CG-CCAAATTTTCATTCACTATTC 33706 || || | || || ||||| | | | || |||| || |||| || || || || || | Sbjct 397600 GCTTCTGGGATTTGGACTTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACGATAC 397543 Query 33707 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGTGTT 33765 ||||| ||| || || || ||||| | | | || || ||| ||||| ||| || | Sbjct 397542 CGTCAGAGGCGGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTTA 397483 Query 33766 AGT--TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATG 33823 | | | ||||| ||| || |||| ||| | || | |||||| | ||||| || | Sbjct 397482 ACTTGTGGTTCCAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCAGCAGTCCAGAAGG 397423 Query 33824 ATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAA 33883 | || || ||||| || ||||| | ||||| || | || | ||||||||| | ||| | Sbjct 397422 AAGCTTCAGCCTTCTTGTACATTTGCCAGACTTCGTGGTACTTGATTGGGAAGAGAACGA 397363 Query 33884 A 33884 | Sbjct 397362 A 397362 >seq5 Length=1741095 Score = 131 bits (144), Expect = 2e-25 Identities = 561/873 (64%), Gaps = 24/873 (3%) Strand=Plus/Plus Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027 ||||||| ||||| || ||||||| || ||||| ||||| || || | | Sbjct 323847 ACTTGATTACACCTAAGTTGCTTTGATTAGATTTCAAATTACAAGCATCTTTGTATAACA 323906 Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087 | ||||| ||| ||||| | || ||||||| || || | ||| | | |||| | Sbjct 323907 TATATGGACCACCTGTTTCTGTTTGTGATTCTAAGATTGCATGCCACAACTTTTGAGCTT 323966 Query 63088 TTATTA-TAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCG 63146 ||| || | ||| || | ||| | | | |||||| || |||||||| | || || Sbjct 323967 TTACTACTTGATGTGCTTTTCCCT-CGATCTCGTATCGTTTATACAATTTAACAAATTCT 324025 Query 63147 TCTCCCCAAACATTGTCC-AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205 ||||| | || | | | ||||| ||| |||||| ||| | | ||| ||||| ||| | Sbjct 324026 TCTCCGTAG-CAGTCTGCTAATCCGGGAGCTTCATCTGGAGAAAACAAAGACCAGTCTTC 324084 Query 63206 GTCATCCTTC--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 63263 | | ||| |||| | ||| || | ||| |||||||| | | | ||| | ||| Sbjct 324085 ATTGT--TTCGTACTCTCTCCATGAACAAATCGGGAATCCATAACCCAAAAAACAAGTCT 324142 Query 63264 CTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 63323 | || || | || || || || ||||| || | || | | | | | | |||| Sbjct 324143 CGTGTCCTGAGCTCTTCCTTGCCGTGGTTCTTCTTCAAGTCTAAAATCTCGAATACATCA 324202 Query 63324 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCT 63383 | |||||| |||||||| ||||| || | | || || | ||| |||||||||||||| Sbjct 324203 GCATGCCATGGTTCCAAATATATAGCAAAGGCCCCTGGTCTTTTATTTCCTCCCTGATCC 324262 Query 63384 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCA 63443 | ||||||||| || | || | ||| | | ||| |||| | ||| ||| | ||| Sbjct 324263 ACGTATCTAGCTGTATCGTTGAAGACTTTAAGCATAGGAACCAAACCACTTGCCGTTCCA 324322 Query 63444 TTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCC 63503 ||||||| || || | | |||| | | ||||| | ||| || ||||| Sbjct 324323 TTGGTACTGGCTATGTGGGCTCCATGTCCTCTTATATTGTGGACATGTAGGCCAATTCCT 324382 Query 63504 CC---TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATG 63560 || |||| || || ||||| || | | |||||| | ||||| || || ||| Sbjct 324383 CCGGATGCC---TTTGAAATTAAAGCTGTTTTATGTAACGTCTTGTAGATGCCGTCGATG 324439 Query 63561 CTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT-AGTTCCCGC 63619 || || ||| | || ||| || |||| | || | ||| ||||| || Sbjct 324440 GAGTCGTCTTCCATTGCTATTAAAAAGCATGATGACAAGTAGTTA-TACTCCGTTCCAGC 324498 Query 63620 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC 63679 ||| | |||||||| || ||||| |||| | || | ||| | || | ||||||||| Sbjct 324499 ATTGTACAAGGTAGGGGACGCGTGAATAAAGTACTTATTAGACATTAACTCGTACGTCTC 324558 Query 63680 AATAGCTGAGTCTA---TATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63735 | | | || | |||| |||| |||| || | || || | | ||||||| Sbjct 324559 GACAACATCTTCCATGTTATCTCCATGGATG----CCAATCGCAACCCTTAGAAACATGT 324614 Query 63736 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63795 ||||| ||||| | ||||| | | ||||| || || ||||| ||||| || | Sbjct 324615 ATTGAGGGGTTTCAGCTATCTTTCCATCAACCTTCAATAAATAAGATTTCTCCAATGTCT 324674 Query 63796 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 63828 | | ||||||||| | || ||| |||| || Sbjct 324675 TGATTCCAAAATAGGTTAATTCAAAATCTCTTT 324707 Score = 93.3 bits (102), Expect = 5e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687 ||||||| ||| |||||||||||||||| |||| | | ||| || ||| | |||| Sbjct 323480 GCACCGTGATATATGGTTTCGAAGATCTGGATATTCAAAACTTTAGCCTCCTCGGAATCA 323539 Query 62688 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62747 ||||| | | || | |||| ||| || || ||||| || || | | | |||||| Sbjct 323540 AATGGCAATCTCAATTCTAGAAACAAGTCAGCCAACCCTTGTACTCCCAAAGCTATAGGT 323599 Query 62748 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATA 62788 |||||||||||||| ||||| |||| | || || ||||| Sbjct 323600 CTATGTCTCTTATTTGAGATCTCAGTTCCTTCGATCGGATA 323640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947098771080