Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 188 2e-42 seq1 91.5 4e-13 >seq4 Length=2182181 Score = 188 bits (208), Expect = 2e-42 Identities = 604/923 (65%), Gaps = 18/923 (2%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | ||||| | |||| ||||||||| | ||| |||| || | | | |||| Sbjct 349874 TTCGGTTTCAAGACTTTAGAGAGATCCTACCTTTTACGTGTCAACGGCAAGGTCGCTGAA 349933 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 | || || ||| || | ||| | ||| |||||||||| || | || |||| Sbjct 349934 AGACCACAACATTTGATCATGAGAGTTTCTATTGGTATTCACGGTGACGACATTGAGAAG 349993 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTC---GTGTATTCACGCACGCCACGCCAACA 363567 | |||||| | ||||| ||| | || ||| || | ||||| |||| | ||||| Sbjct 349994 GTCATTGAATCTTATAA-CTTG-ATGT-CTCAACGTTTCTTCACCCACGGTTCTCCAACT 350050 Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627 ||| ||| ||||| || | |||||| ||||||||||| || ||| | |||||| Sbjct 350051 TTGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCCATGAAG 350110 Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687 ||||| || || || ||||| | || || | |||| ||||| | |||||||||| | Sbjct 350111 GACGACTCTATTGATGGTATTTACGATACCTTGAAGACCTGTGCCTTGATTTCCAAGAGT 350170 Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATTCGCGG 363746 || || || |||||| | || ||||| | || | ||| | ||||||| || Sbjct 350171 GCTGGTGGTATTGGTTTGCACATTCACAACATCCGTTCCACTG-GTGCTTACATTGCTGG 350229 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || |||||| || | |||| ||| ||||||| || |||| ||||| || Sbjct 350230 TACTAATGGTACCTCGAACGGTATTATTCCAATGGTTCGTGTCTTCAACAACACTGCTAG 350289 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||||| ||||| ||||| ||||| ||| || ||||| |||| | ||||| Sbjct 350290 ATACGTTGACCAAGGTGGTAACAAGCGTCCAGGTGCTTTTGCCTTGTACTTGGAGCCATG 350349 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAATTGC 363925 || || || || || || || |||| || | || || ||| || || || ||| | Sbjct 350350 GCACGCAGACATCTTCGACTTCATTGACATCAGAAAGAATCAC-GGTAAGGAAGAAATCA 350408 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985 | || | || ||||| || | ||| || | || || |||||| | || || Sbjct 350409 GAGCCAGAGACTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATGAAGAGAGTCGAAC 350468 Query 363986 CA---GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC-GATGTA 364041 | ||| ||||| | || || | ||| ||||| |||||| ||| || || || Sbjct 350469 AAAACGGT---GATTGGACTCTTTTCTCTCCAAACGAAGCTCCAGG-CTTGCCAGAAGTT 350524 Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101 | |||||||| | | | |||||||| || || || |||| | | | || Sbjct 350525 TACGGTGACGAATTCGAGGAGTTATACGAACGTTACGAGAGAGAAGGAAGAGGTAGAAAC 350584 Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 || | || || ||| | |||| || ||| |||| | |||| ||| || || || Sbjct 350585 ACTGTCAAGGCTCAAAAGTTGTGGTACGCTATCTTGGAAGCTCAGACTGAAACCGGTACT 350644 Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221 || | ||||||||||| ||| | || ||| ||| ||||||| || || | |||| | Sbjct 350645 CCTTTCATGTTGTACAAGGATGCCTGTAACAAGAAGACCAACCAAAAGAACTTGGGTATA 350704 Query 364222 ATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 || || ||| | ||| ||||| |||| ||| || |||| || || ||| Sbjct 350705 ATCAAGTCTTCTAACTTGTGTTGTGAGATCGTTGAGTACTCCTCTCCAGAAGAAGTTGCT 350764 Query 364282 GTATGTAACCTTGCGTCGATCGC 364304 || |||||| | || |||||||| Sbjct 350765 GTCTGTAACTTGGCCTCGATCGC 350787 >seq1 Length=3044122 Score = 91.5 bits (100), Expect = 4e-13 Identities = 251/370 (68%), Gaps = 16/370 (4%) Strand=Plus/Plus Query 111351 GGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCA 111410 |||||| | | ||||| ||||||| || ||||| ||| | || || | ||| | Sbjct 1793383 GGAATTATGCATGAACTCTTGTGGTTCGTTGCTGGAAGCACAGACGCCAA-GTTGTTG-A 1793440 Query 111411 GCAAAAAATG--TAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTG 111468 || ||||| | | ||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 1793441 GCGAAAAAGGCGTGAAAATCTGGGAAGGAAATGGATCTCGTGAGTTCTTGGACA-AGTTG 1793499 Query 111469 GTCTTGTCGACAACGAAGA--AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCA 111526 | ||| | |||| ||| ||||||| | ||||||||||||||||| || ||| | || Sbjct 1793500 GGTTTGACCG-AACGTAGAGAAGGTGATTTGGGACCAGTTTACGGATTCCAGTGGAGACA 1793558 Query 111527 CTTTGGTGCAGACTACAA-AACCATG-CAC-GACTCATATGATTCACAGGGAACTGATCA 111583 || || || || ||||| | || ||| |||| | | || ||| ||| || Sbjct 1793559 TTTCGGAGCTGAATACAAGGATTGTGACACAGACTACACCGGT---CAAGGATTTGACCA 1793615 Query 111584 ATTACAGAATGTCATTGATCAAATTAAGAACAACCCA-ACTTCTCGTCGCATTATTATGA 111642 || || ||||||| | | | |||| |||||| || | | | ||||| ||| Sbjct 1793616 GTTGCAAGATGTCATCAAGAAGTTAAAGACAAACCCATACGAC-AGAAGAATTATCATGT 1793674 Query 111643 GTGCATGGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCC 111702 || ||||| ||| | || | ||| ||||| | |||||||||||| | | |||| Sbjct 1793675 CCGCTTGGAATCCACCAGACTTTGGAAAGATGGCCTTACCACCATGTCATGTCTTCTGCC 1793734 Query 111703 AGTTTTATGT 111712 |||| || || Sbjct 1793735 AGTTCTACGT 1793744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353382910166