Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2 127 2e-24 seq4 114 1e-20 >seq2 Length=2390349 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || || |||||||| || || | || || | ||||||||| || Sbjct 2170601 AATGCAAATCTTCGTTAAGACATTAACAGGTAAGACTATCACTCTTGAAGTCGAGTCCTC 2170542 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| || | ||||| ||||| ||||| ||||| || || || || || Sbjct 2170541 TGACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 2170482 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| ||| |||||| || || |||||| | ||||| | |||| | || || || Sbjct 2170481 ACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAA 2170422 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||||||| || |||| || || |||||||||||||| || Sbjct 2170421 CATTCAAAAAGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 2170374 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| || | |||||| | ||||||||| | | Sbjct 2170372 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCTTCC 2170313 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || ||||| ||||| ||||| || || || || ||| Sbjct 2170312 GACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2170253 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||||| || || |||||| | ||||| | |||| | || || ||| Sbjct 2170252 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 2170193 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| || |||| || || |||||||||||||| || Sbjct 2170192 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 2170146 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| || | || || | ||||| ||| || Sbjct 2169619 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATCACTCTTGAAGTTGAGTCCTCT 2169560 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || ||||| ||||| ||||| || || || || ||| Sbjct 2169559 GACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2169500 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | || || |||||| | ||||||| ||||| | || || ||| Sbjct 2169499 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTCTTTCTGACTACAAC 2169440 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 || ||||| ||||| || |||| || || || ||||||||||| || | |||| Sbjct 2169439 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTCAATAA 2169386 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| || | || ||| |||| || ||| | Sbjct 2170144 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACCATCACCCTCGAGGTTGAGTCTTCT 2170085 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || ||||| ||||| ||||| || || || || ||| Sbjct 2170084 GACACTATCGACAACGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2170025 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | | || | || || |||||| | ||||| | |||| || || || ||| Sbjct 2170024 CAGCGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTCTCTGACTACAAC 2169965 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATT 24208 |||||||||||||| || |||| || || |||||||| Sbjct 2169964 ATTCAAAAAGAATCCACTCTTCACTTGGTTTTAAGATT 2169927 >seq4 Length=2182181 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 |||||||||| | || || || || ||||| || || | |||||| | ||||||||| | Sbjct 2129010 CAAAATGCAAATTTTCGTCAAGACTTTAACAGGTAAGACCATTACCTTGGAAGTCGAGTC 2128951 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | ||||||||| || | ||||| ||||| ||||| ||||| || || || || Sbjct 2128950 CTCCGACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCTGA 2128891 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| ||| |||| | || || ||||| | ||||| | |||| | | || || Sbjct 2128890 CCAACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACCCTTTCTGACTA 2128831 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || || || || | || || || |||||||||||||| || Sbjct 2128830 CAACATCCAGAAGGAGTCCACCTTGCACTTGGTCTTAAGATTGAGAGGTGG 2128780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935931882015