Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 5e-12 seq2 84.2 2e-11 >seq4 Length=2182181 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||||||||| ||||| || | || || || ||||||||| | ||| |||||| Sbjct 2129009 AAAATGCAAATTTTCGTCAAGACTTTAACAGGTAAGACCATTACCTTGGAAGTCGAGTCC 2128950 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 |||||| || ||||| || || || || || || ||||| | || ||| Sbjct 2128949 TCCGACACCATT-GACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCTGA 2128891 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || |||||| | || | || || || || || ||||| | | |||| | | || || Sbjct 2128890 CCAACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACCCTTTCTGACTA 2128831 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || || ||||| || | || |||| || |||||| |||| || Sbjct 2128830 CAACATCCAGAAGGAGTCCACCTTGCACTTGGTCTTAAGATTGAGAGGTGG 2128780 >seq2 Length=2390349 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || | || || || ||||||||| | ||| ||||| | Sbjct 2170372 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCTTCC 2170313 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | ||||| || || || || || || ||||| | || ||| || Sbjct 2170312 GACACT-ATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 2170254 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| || || || ||||| ||||| | | ||| | | || || || Sbjct 2170253 ACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAA 2170194 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || || ||| | || |||| || |||||| |||| || Sbjct 2170193 CATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 2170146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343932609560