Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4 242 5e-59 seq5 129 7e-25 >seq4 Length=2182181 Score = 242 bits (268), Expect = 5e-59 Identities = 751/1143 (66%), Gaps = 22/1143 (2%) Strand=Plus/Minus Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882 ||||||| | || || || | ||| || |||| |||||||| |||||||| || | | Sbjct 350711 ACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCATCCTTGTACAACA 350652 Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 62942 |||| |||||||| |||||| |||||| ||| | || || | ||| | | |||||| Sbjct 350651 TGAAAGGAGTACCGGTTTCAGTCTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 350592 Query 62943 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGT--GTATACAATCGTTCGAAC 62998 | | | ||| || ||||| |||||| ||||| || ||||| | || | |||| Sbjct 350591 TGACAGTG--TTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTATA-ACTCCT-CGAAT 350536 Query 62999 TCGTCTCCCCAAACAT-TGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTC 63057 ||||| || |||| | || | || || ||| ||| | ||| | | | | ||| || Sbjct 350535 TCGTCACCGTAAACTTCTGGCAAG-CCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATC 350477 Query 63058 TCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATC 63117 |||| | | |||| ||||| || | ||| |||||||| | |||| || | || Sbjct 350476 ACCGTTTTGTTCGACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAGTC 350417 Query 63118 TCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 63177 ||||| ||| ||| || || || ||||||| | | || | ||| | | || || Sbjct 350416 TCTGGCTCTGATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTC 350357 Query 63178 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 63237 | ||||| || |||||||| | ||| | | | || || || ||||| || || || || Sbjct 350356 TGCGTGCCATGGCTCCAAGTACAAGGCAAAAGCACCTGGACGCTTGTTACCACCTTGGTC 350297 Query 63238 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACC 63297 | ||||||||| ||||| || | || | | ||||||||||||||| || || ||||| Sbjct 350296 AACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTGGAATAATACCGTTCGAGGTACC 350237 Query 63298 ATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCC 63357 ||| || || | || || ||| ||| ||| || || ||| | ||| || || Sbjct 350236 ATTAGTACCAGCAATGTAAGCACCAGTGGAACGGATGTTGTGAATGTGCAAACCAATACC 350177 Query 63358 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACT 63417 || || | || || || || || || || || ||||| || || || || ||| Sbjct 350176 ACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAGGTATCGTAAATACCATCAATAGA 350117 Query 63418 ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATT 63477 || ||| ||||| | || ||||| ||||||||| || || || || || Sbjct 350116 GTCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTACCAGCGTT 350057 Query 63478 AAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 63537 || || || |||||| |||| || || | || ||| | | || || | ||||| Sbjct 350056 GAACAAAGTTGGAGAACCGTGGGTGAAGAAACGTTGAGACATCAAGTTATAAGATTCAAT 349997 Query 63538 AGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAG 63596 | || || || || | ||||| || | | || | ||| | || || || | Sbjct 349996 GACCTTCTCAATGTCGTCACCG-TGAATACCAATAGAAACTCTCATGATCAAATGTTGTG 349938 Query 63597 GTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAAC 63656 |||||||| ||| |||| ||| | || | ||||||| | || ||||| || |||| Sbjct 349937 GTCTTTCAGCGACCTTGCCGTTGACACGTAAAAGGTAGGATCTCTCTAAAGTCTTGAAAC 349878 Query 63657 CAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714 | || |||||||| ||||| || || ||||||| ||| | ||||| | | ||| Sbjct 349877 CGAAGTAGTTGTAGTTGAAA--TCACGGTCGTAAACAATGGCAGAGTTCAACTCGTCCGA 349820 Query 63715 ATATTTGTTAACTACATC-CATGGTAATACTT-GAAATAATAGGAAAATGTTTCCCATTT 63772 | ||| | | ||| ||| | | ||| || || |||||| | || ||| | Sbjct 349819 GTGCTTGAGGATGATATCGTATGTT--TCCTTAGAGATCATAGGAGAGTGCAATCCAGTC 349762 Query 63773 TTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCT 63832 || || |||| |||| | | || || | ||| | || | || | |||| Sbjct 349761 TTTGGGTTGATGTAGTCGTACAACTCTTTGGACACGGCGGAGTATTGCTTGGTGGTTTGC 349702 Query 63833 TTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTA 63892 ||||| | || || || || ||||||||||| |||||||| || ||||| || ||| Sbjct 349701 TTGTGCAAGTTGGAAACAGCGATTCTAGCGGCGAGAATGGCGTAGTCCGGGTGAATGGTA 349642 Query 63893 GTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATT 63951 || || || ||| || | || || |||| ||||||| || | || || ||||||| Sbjct 349641 GT-CATGTAGGCGGCAGTCTCAGCAGCCAAGTTGTCCAACTCGATGGTGGTGACACCATG 349583 Query 63952 ATA 63954 ||| Sbjct 349582 ATA 349580 Score = 179 bits (198), Expect = 5e-40 Identities = 585/901 (65%), Gaps = 26/901 (3%) Strand=Plus/Minus Query 32357 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 32416 |||||| || |||||||| |||| || | || ||||| || || || ||||| | Sbjct 398252 CATAACACCAGCCTTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTGGTCTTACCAGC 398193 Query 32417 TAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCC 32476 || || || ||||||||||| |||||||| ||||| || || || | || || || Sbjct 398192 CAAAGAGATGTTTTCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTACC 398133 Query 32477 CAATTCAGAAATCAAT---CTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACA 32533 ||| || ||||||| || || || || ||||| | ||| ||||| || Sbjct 398132 CAA---AGCAATCAATAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAACTCGGC 398076 Query 32534 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 32593 ||||| || | | ||||| | ||| | || | |||||||| ||||| ||| Sbjct 398075 GTTCATACCCAACAAGGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCAATCTTGAC 398016 Query 32594 CGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT-----AAATGT 32648 || || || || |||||| || | ||| ||| | | || || Sbjct 398015 GGCCTCAGTGAT----GATCTT-CTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGG 397961 Query 32649 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 32708 || | |||||| ||||| || ||| | ||| || ||||| | || || ||||| Sbjct 397960 GAGAATAACAAACAGGCGAAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTA 397901 Query 32709 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 32768 || || || | || ||||| | || | ||| || | ||| || ||||| || || || Sbjct 397900 GAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAA 397841 Query 32769 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 32828 ||| |||||||| ||||| || || ||||| |||| | ||| || || | ||| Sbjct 397840 CCACTGAAGAAAATACCTTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCC 397781 Query 32829 CTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTC 32885 |||| ||||| | ||||||||| ||||||||| | | || || || | Sbjct 397780 TCATCATCAGAGATCCATCTCAAAGCCCAATCAGCCTTCTTTCTGATGCATGGAATGTTG 397721 Query 32886 TCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAA 32945 || || || || || || ||| ||| ||| || ||||| || || ||||| || Sbjct 397720 TCAATGGCGTTGAAAAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAAC 397661 Query 32946 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTA 33005 | | || | || || ||||||||||| || ||||| || |||||||| || | Sbjct 397660 AAAGAGTAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTG 397601 Query 33006 GCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTC 33063 || || | || || ||||| | | | || ||||| | || || || || || || | Sbjct 397600 GCTTCTGGGATTTGGACTTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACGATAC 397543 Query 33064 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGTGTT 33122 ||||| ||| || || || ||||| | | | || || ||| ||||| ||| || | Sbjct 397542 CGTCAGAGGCGGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTTA 397483 Query 33123 AGT--TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 33180 | | | ||||| ||| || |||| ||| | || | |||||| | ||||| || | Sbjct 397482 ACTTGTGGTTCCAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCAGCAGTCCAGAAGG 397423 Query 33181 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAA 33240 | || || ||||| || ||||| | ||||| || || || | ||||| || | ||| | Sbjct 397422 AAGCTTCAGCCTTCTTGTACATTTGCCAGACTTCGTGGTACTTGATTGGGAAGAGAACGA 397363 Query 33241 A 33241 | Sbjct 397362 A 397362 >seq5 Length=1741095 Score = 129 bits (142), Expect = 7e-25 Identities = 794/1249 (64%), Gaps = 69/1249 (6%) Strand=Plus/Plus Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCA 62542 ||||||| ||| |||||||||||||||| |||| | | ||| || ||| | |||| Sbjct 323480 GCACCGTGATATATGGTTTCGAAGATCTGGATATTCAAAACTTTAGCCTCCTCGGAATCA 323539 Query 62543 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 62602 ||||| | | || | |||| ||| || || ||||| || || | | | |||||| Sbjct 323540 AATGGCAATCTCAATTCTAGAAACAAGTCAGCCAACCCTTGTACTCCCAAAGCTATAGGT 323599 Query 62603 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62662 |||||||||||||| ||||| |||| | || || ||||| | | | ||||| | Sbjct 323600 CTATGTCTCTTATTTGAGATCTCAGTTCCTTCGATCGGATATTTTGTGACGTCTATTACC 323659 Query 62663 TTATTGAGATT--TC-TGACAATTACTTTGACCACATCCT------TC--AGT----TTG 62707 ||||| | ||| || ||| || | | ||| | ||| | || ||| ||| Sbjct 323660 TTATTCAAATTCTTCGTGAGAACTTTTGTGATCG-ATCTTAATTTCTCGAAGTCGAATTG 323718 Query 62708 AGAAAATCA------AATCG---------CCCATCTATTACAAACATGTTCAATGCAACA 62752 | | | | ||| || | || || || ||| | ||||| | Sbjct 323719 TAAGACTTCTTCGGCATTCGAGGTAGATACCGACTTAATA-AAGGATGGT-AATGCTAAG 323776 Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA- 62811 ||| | | ||||||||| ||| ||| | | || ||| | | ||||| || Sbjct 323777 GATCCTAAATTACAAACTGCTGTCTCCTCTGGTGACGAATACTCCACAATCTCGCAACAT 323836 Query 62812 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 62871 ||| || | ||||||| ||||| || ||||||| || ||||| ||||| Sbjct 323837 AAGTTTGATG-ACTTGATTACACCTAAGTTGCTTTGATTAGATTTCAAATTACAAGCATC 323895 Query 62872 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 62931 || || | || ||||| ||| ||||| | || ||||||| || || | ||| | Sbjct 323896 TTTGTATAACATATATGGACCACCTGTTTCTGTTTGTGATTCTAAGATTGCATGCCACAA 323955 Query 62932 GACTCGAGCCTTTATTA-TAGATTTGTATCTCTTTTCTC--TTTCGTATAGTGTATACAA 62988 | |||| |||| || | ||| || || || ||| | |||||| || ||||||| Sbjct 323956 CTTTTGAGCTTTTACTACTTGATGTG---CTTTTCCCTCGATCTCGTATCGTTTATACAA 324012 Query 62989 TCGTTCGAACTCGTCTCCCCAAACATTGTCC-AGTCCAGGACATTCATCCGGACACATCA 63047 | | || || ||||| | || | | | | ||| ||| |||||| ||| | | || Sbjct 324013 TTTAACAAATTCTTCTCCGTAG-CAGTCTGCTAATCCGGGAGCTTCATCTGGAGAAAACA 324071 Query 63048 ACGACCACTCTCCGTCATCCTTC--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63105 | ||||| ||| | | | ||| |||| | ||| || | ||| |||||||| | | Sbjct 324072 AAGACCAGTCTTCATTGT--TTCGTACTCTCTCCATGAACAAATCGGGAATCCATAACCC 324129 Query 63106 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63165 | ||| | |||| || || | || || || || ||||| || | || | | Sbjct 324130 AAAAAACAAGTCTCGTGTCCTGAGCTCTTCCTTGCCGTGGTTCTTCTTCAAGTCTAAAAT 324189 Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225 | | | | ||||| |||||| |||||||| ||||| || | | || || | ||| || Sbjct 324190 CTCGAATACATCAGCATGCCATGGTTCCAAATATATAGCAAAGGCCCCTGGTCTTTTATT 324249 Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285 |||||||||||| | ||||||||| || | || | ||| | | ||| |||| | ||| Sbjct 324250 TCCTCCCTGATCCACGTATCTAGCTGTATCGTTGAAGACTTTAAGCATAGGAACCAAACC 324309 Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63345 | | | || |||||||| | | || | | |||| | | ||||| | Sbjct 324310 ACTTGCCGTTCCATTGGTACTGGCTATGTGGGCTCCATGTCCTCTTATATTGTGGACATG 324369 Query 63346 TAGACCTATTCCCCC---TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 63402 ||| || ||||| || |||| || || ||||| || | | |||||| | || Sbjct 324370 TAGGCCAATTCCTCCGGATGCC---TTTGAAATTAAAGCTGTTTTATGTAACGTCTTGTA 324426 Query 63403 GATGCCCTCTAT--ACT-ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63459 |||||| || || | | || ||||| || | | || ||| || |||| | || Sbjct 324427 GATGCCGTCGATGGAGTCGTCTTCCAT--TGCT-ATTAAAAAGCATGATGACAAGTAGTT 324483 Query 63460 ACGACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAA 63518 | ||| ||||| ||||| | |||||||| || |||||| |||| | || | ||| | Sbjct 324484 A-TACTCCGTTCCAGCATTGTACAAGGTAGGGGACGCGTGAATAAAGTACTTATTAGACA 324542 Query 63519 GTAGATTGTACGTCTCAATAGCTGAGTCTA---TATC-CCATTGATGAATTCCTACTGCG 63574 || | ||||||||| | | | || | |||| |||| |||| || | || Sbjct 324543 TTAACTCGTACGTCTCGACAACATCTTCCATGTTATCTCCATGGATG----CCAATCGCA 324598 Query 63575 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 63634 || | | ||||||| ||||| ||||| | ||||| | | ||||| || || Sbjct 324599 ACCCTTAGAAACATGTATTGAGGGGTTTCAGCTATCTTTCCATCAACCTTCAATAAATAA 324658 Query 63635 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 63683 ||||| ||||| || || | ||||||||| | || ||| |||| || Sbjct 324659 GATTTCTCCAATGTCTTGATTCCAAAATAGGTTAATTCAAAATCTCTTT 324707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631897034800