Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 3e-27
seq4 120 3e-22
>seq2
Length=2390349
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| || ||||| ||||| || ||||||||||||| || || |
Sbjct 2170600 ATGCAAATCTTCGTTAAGACATTAACAGGTAAGACTATCACTCTTGAAGTCGAGTCCTCT 2170541
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || || ||||||||||| ||||||||||| || |||
Sbjct 2170540 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2170481
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || || || || || || || || | || | || || ||||||
Sbjct 2170480 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 2170421
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||||||||| | || || ||||| ||||| | || |||
Sbjct 2170420 ATTCAAAAAGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGGT 2170373
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || ||||| || ||||| || ||||||||||||| || || |
Sbjct 2169619 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATCACTCTTGAAGTTGAGTCCTCT 2169560
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || || ||||||||||| ||||||||||| || |||
Sbjct 2169559 GACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2169500
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || || || || || || || ||| | | || | || || ||||||
Sbjct 2169499 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTCTTTCTGACTACAAC 2169440
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| |||||||| | || || |||||| ||||| | || |||
Sbjct 2169439 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGT 2169392
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || ||||| || ||||| || |||| || || || || | |
Sbjct 2170144 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACCATCACCCTCGAGGTTGAGTCTTCT 2170085
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || || ||||||||||| ||||||||||| || |||
Sbjct 2170084 GACACTATCGACAACGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2170025
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || || || || || || || || | || |||| || ||||||
Sbjct 2170024 CAGCGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTCTCTGACTACAAC 2169965
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
||||||||||||||||| | || || ||||| ||||
Sbjct 2169964 ATTCAAAAAGAATCCACTCTTCACTTGGTTTTAAGATT 2169927
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || ||||| || ||||| || | || | ||||| || | ||
Sbjct 2170372 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCTTCC 2170313
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || || ||||||||||| ||||||||||| || |||
Sbjct 2170312 GACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2170253
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || || || || || || || || | || | || || ||||||
Sbjct 2170252 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 2170193
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| |||||||| | || || ||||| ||||| | || |||
Sbjct 2170192 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGGT 2170145
>seq4
Length=2182181
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||||||||| || || |||||||| ||||| || | || | ||||| || ||
Sbjct 2129009 AAAATGCAAATTTTCGTCAAGACTTTAACAGGTAAGACCATTACCTTGGAAGTCGAGTCC 2128950
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | ||| || |||| || || || |||||||| ||||||||||| ||
Sbjct 2128949 TCCGACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCTGAC 2128890
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || || || || || ||||| || || | ||| | || || |||
Sbjct 2128889 CAACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACCCTTTCTGACTAC 2128830
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || |||||| | || || || || ||||| | || |||
Sbjct 2128829 AACATCCAGAAGGAGTCCACCTTGCACTTGGTCTTAAGATTGAGAGGTGGT 2128779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727933499345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |