Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2 185 2e-41 seq4 183 6e-41 >seq2 Length=2390349 Score = 185 bits (204), Expect = 2e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||| || ||||| || ||||||||||| || || || || || || || ||| Sbjct 2170161 AAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCT 2170220 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || ||||| || ||||| || | |||||||||||| |||||||| |||||||||||| Sbjct 2170221 TCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCT 2170280 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | ||| ||| ||||| ||||| | || || ||||||||||| ||||| Sbjct 2170281 TGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCGACTTCCAAGGTAATGGTC 2170340 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 2170341 TTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170372 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || ||||| || ||||||||||| || || || || || || ||||| Sbjct 2169407 CAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCATC 2169466 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || ||||| || | |||||||||||| |||||||| ||||||||||| Sbjct 2169467 TTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 2169526 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||| ||| ||||| ||||| | || || ||||| | ||||| || Sbjct 2169527 TTGGATCTTGGACTTAACGTTGTCGATAGTGTCAGAGGACTCAACTTCAAGAGTGATAGT 2169586 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 2169587 CTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2169619 Score = 172 bits (190), Expect = 1e-37 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||| || ||||| |||||||| ||||| || || || || || || || ||| Sbjct 2170389 AAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTACCGTCT 2170448 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || ||||| || ||||| || | |||||||||||| |||||||| |||||||||||| Sbjct 2170449 TCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCT 2170508 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | ||||||| || |||||||| | || || ||||| | ||||| || Sbjct 2170509 TGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCGACTTCAAGAGTGATAGTC 2170568 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | ||||| ||||| || |||||| Sbjct 2170569 TTACCTGTTAATGTCTTAACGAAGATTTGCATT 2170601 Score = 167 bits (184), Expect = 4e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||| || ||||| |||||||| ||||| || || ||||| || || || ||| Sbjct 2169933 AAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACCGTCT 2169992 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || ||||| || ||||| || | | |||||||| |||||||| |||||||||||| Sbjct 2169993 TCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCAGGTGGAATACCTTCCTTGTCT 2170052 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | ||| ||| ||||| ||||| | || || || || | ||||||||| Sbjct 2170053 TGGATCTTAGACTTAACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTC 2170112 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 2170113 TTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170144 >seq4 Length=2182181 Score = 183 bits (202), Expect = 6e-41 Identities = 170/216 (79%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||| | |||||||| || |||||||| || || || || || || || ||| Sbjct 2128795 AAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCT 2128854 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || |||||||| || ||||| || | |||||||||||| |||||||| ||||||||||| Sbjct 2128855 TCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCC 2128914 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | |||||| || |||||||| | || || ||||||||||| ||||| Sbjct 2128915 TGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTC 2128974 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || || | ||||||||||| || |||||| || Sbjct 2128975 TTACCTGTTAAAGTCTTGACGAAAATTTGCATTTTG 2129010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622250236360