Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq4 165 2e-35
>seq4
Length=2182181
Score = 165 bits (182), Expect = 2e-35
Identities = 568/872 (65%), Gaps = 24/872 (3%)
Strand=Plus/Plus
Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGC 42343
||| || |||| || ||||| |||||||||||||| | || | ||| |||||| ||
Sbjct 397377 ATCAAGTACCACGAAGTCTGGCAAATGTACAAGAAGGCTGAAGCT-TCCTTCTGGACTGC 397435
Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACG 42399
|| || || ||| || ||||| || | | |||| | ||| | | |||||
Sbjct 397436 TGAAGAAATCGACTTGAGTAAGGATACCACTGACTGGAAC-CACAAGTTAAACAAGAACG 397494
Query 42400 AAAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATG 42459
||| | ||| | || |||| |||||||||||||||||||| || ||||| |
Sbjct 397495 AAAGATACTTCATTTCCCGTATCTTGGCTTTCTTCGCCGCCTCTGACGGTATCGTCAACG 397554
Query 42460 AGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACG 42519
||||| ||| | | ||| || || || | || || || |||||||
Sbjct 397555 AGAACTTGGTCGAGAACTTCTCTGCCGAAGTCCAAATCCCAGAAGCCAAGTGTTTCTACG 397614
Query 42520 GCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGT 42579
| ||||| || || || ||| | ||||| ||| ||| | | | |||| |
Sbjct 397615 GTTTCCAAATCATGATGGAAAACATTCACTCCGAGACTTACTCTTTGTTAATTGACACTT 397674
Query 42580 ACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCA 42639
|| | ||| || || | || || ||||| ||||| || | || || ||||
Sbjct 397675 ACGTTAAGGACCCTAAGGAAGCTGACTTCCTTTTCAACGCCATTGACAACATTCCATGCA 397734
Query 42640 TCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCG 42699
||| |||||||| || ||||| | | |||||| | || || |||||| |
Sbjct 397735 TCAGAAAGAAGGCTGATTGGGCTTTGAGATGGATCTCTGATGATGAGGCCTTGTTCGGTG 397794
Query 42700 AGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCA 42759
| || | || || ||| | ||||| || || || |||||| || | ||||| ||||
Sbjct 397795 AAAGATTAGTTGCTTTTGCTGCCGTTGAAGGTATTTTCTTCAGTGGTTCTTTCGCTTCCA 397854
Query 42760 TCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATC 42818
|||||||| | ||| ||| |||| | |||||| || | || ||||| ||||| | |||
Sbjct 397855 TCTTCTGGTTGAAGAAGAGAGGT-TTGATGCCAGGTTTGACTTTCTCTAACGAGTTGATC 397913
Query 42819 AGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGG 42878
|||| || || || |||| | ||||| ||||| | | ||||| |||| | |
Sbjct 397914 TGCAGAGATGAAGGTTTGCACACTGACTTCGCCTGTTTGTTATTCTC---CCACTT---G 397967
Query 42879 CACA--AGCCCTCGAAGGAG--CGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGA 42934
|| | || || || || || | |||||||| |||||||| |||| ||
Sbjct 397968 CAAAACAGACC-AGACCCAGTTATTGTTGAGAAGATCATCACTGAGGCCGTCAAGATTGA 398026
Query 42935 GAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCAT 42994
| | || ||| |||| | | |||| || ||| || | || |||||| ||| | ||
Sbjct 398027 GCAAGAATTCTTCACCGACGCTTTGCCAGTCTCCTTGTTGGGTATGAACGCCGAGTTGAT 398086
Query 42995 GTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGGTCTCAGCCGC 43052
|||| | ||| || | | ||| |||||| | || ||| ||||| ||
Sbjct 398087 GTGCCAATACGTCGAATTCGTTGCCGACAGATTATTGATTGC--TTTGGGTAACAAGAAG 398144
Query 43053 CTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACC 43112
|||||||| | ||| |||||||| ||||| |||||||| |||| || ||||||
Sbjct 398145 GTCTACAACGTCACCAACCCATTCGACTTCATGGAAAACATCTCTTTGGCTGGTAAGACC 398204
Query 43113 AACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
||||| ||||||||| | ||| ||||||||
Sbjct 398205 AACTTCTTCGAGAAGAGAGTCAGTGACTACCA 398236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944339046544880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |