Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4 165 2e-35 >seq4 Length=2182181 Score = 165 bits (182), Expect = 2e-35 Identities = 568/872 (65%), Gaps = 24/872 (3%) Strand=Plus/Plus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGC 42343 ||| || |||| || ||||| |||||||||||||| | || | ||| |||||| || Sbjct 397377 ATCAAGTACCACGAAGTCTGGCAAATGTACAAGAAGGCTGAAGCT-TCCTTCTGGACTGC 397435 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACG 42399 || || || ||| || ||||| || | | |||| | ||| | | ||||| Sbjct 397436 TGAAGAAATCGACTTGAGTAAGGATACCACTGACTGGAAC-CACAAGTTAAACAAGAACG 397494 Query 42400 AAAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATG 42459 ||| | ||| | || |||| |||||||||||||||||||| || ||||| | Sbjct 397495 AAAGATACTTCATTTCCCGTATCTTGGCTTTCTTCGCCGCCTCTGACGGTATCGTCAACG 397554 Query 42460 AGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACG 42519 ||||| ||| | | ||| || || || | || || || ||||||| Sbjct 397555 AGAACTTGGTCGAGAACTTCTCTGCCGAAGTCCAAATCCCAGAAGCCAAGTGTTTCTACG 397614 Query 42520 GCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGT 42579 | ||||| || || || ||| | ||||| ||| ||| | | | |||| | Sbjct 397615 GTTTCCAAATCATGATGGAAAACATTCACTCCGAGACTTACTCTTTGTTAATTGACACTT 397674 Query 42580 ACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCA 42639 || | ||| || || | || || ||||| ||||| || | || || |||| Sbjct 397675 ACGTTAAGGACCCTAAGGAAGCTGACTTCCTTTTCAACGCCATTGACAACATTCCATGCA 397734 Query 42640 TCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCG 42699 ||| |||||||| || ||||| | | |||||| | || || |||||| | Sbjct 397735 TCAGAAAGAAGGCTGATTGGGCTTTGAGATGGATCTCTGATGATGAGGCCTTGTTCGGTG 397794 Query 42700 AGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCA 42759 | || | || || ||| | ||||| || || || |||||| || | ||||| |||| Sbjct 397795 AAAGATTAGTTGCTTTTGCTGCCGTTGAAGGTATTTTCTTCAGTGGTTCTTTCGCTTCCA 397854 Query 42760 TCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATC 42818 |||||||| | ||| ||| |||| | |||||| || | || ||||| ||||| | ||| Sbjct 397855 TCTTCTGGTTGAAGAAGAGAGGT-TTGATGCCAGGTTTGACTTTCTCTAACGAGTTGATC 397913 Query 42819 AGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGG 42878 |||| || || || |||| | ||||| ||||| | | ||||| |||| | | Sbjct 397914 TGCAGAGATGAAGGTTTGCACACTGACTTCGCCTGTTTGTTATTCTC---CCACTT---G 397967 Query 42879 CACA--AGCCCTCGAAGGAG--CGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGA 42934 || | || || || || || | |||||||| |||||||| |||| || Sbjct 397968 CAAAACAGACC-AGACCCAGTTATTGTTGAGAAGATCATCACTGAGGCCGTCAAGATTGA 398026 Query 42935 GAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCAT 42994 | | || ||| |||| | | |||| || ||| || | || |||||| ||| | || Sbjct 398027 GCAAGAATTCTTCACCGACGCTTTGCCAGTCTCCTTGTTGGGTATGAACGCCGAGTTGAT 398086 Query 42995 GTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGGTCTCAGCCGC 43052 |||| | ||| || | | ||| |||||| | || ||| ||||| || Sbjct 398087 GTGCCAATACGTCGAATTCGTTGCCGACAGATTATTGATTGC--TTTGGGTAACAAGAAG 398144 Query 43053 CTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACC 43112 |||||||| | ||| |||||||| ||||| |||||||| |||| || |||||| Sbjct 398145 GTCTACAACGTCACCAACCCATTCGACTTCATGGAAAACATCTCTTTGGCTGGTAAGACC 398204 Query 43113 AACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||| ||||||||| | ||| |||||||| Sbjct 398205 AACTTCTTCGAGAAGAGAGTCAGTGACTACCA 398236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339046544880