Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=3044122 Score = 87.8 bits (96), Expect = 2e-12 Identities = 264/405 (65%), Gaps = 12/405 (3%) Strand=Plus/Minus Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 || || || || || || | ||||| || || | |||||| ||||| | || Sbjct 1793744 ACGTAGAACTGGCAGAAGACATGACATGGTGGTAAGGCCATCTTTCCAAAGTCTGGTGGA 1793685 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| || |||| || |||||||| |||| || || | |||| | | | ||| Sbjct 1793684 TTCCAAGCGGACATGATAATTCTTCTGTCGTATGGGTTTGTCTTTA---ACTTCTTGATG 1793628 Query 20477 ---TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCC 20533 | ||| |||||||| || || || || ||||| | || ||| ||| | Sbjct 1793627 ACATCTTGCAACTGGTCAAATCCTTGACCGGTGTAGTCTGTGTCACAATCCTTGTATTCA 1793568 Query 20534 GCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGC 20593 || || || || ||||||||||| |||||||| ||||||||||| || || || | | Sbjct 1793567 GCTCCGAAATGTCTCCACTGGAATCCGTAAACTGGTCCCAAATCACCTTCTCTACGTTCG 1793508 Query 20594 GCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCT 20653 | || || | | ||| |||||| | || |||||| ||||| || || || ||| Sbjct 1793507 GTCAAACCCAACTTGTCCAAGAACTCACGAGATCCATTTCCTTCCCAGATTTTCACGCCT 1793448 Query 20654 GTT---CTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGC 20710 || || | | || ||| ||| || || || | ||||| | || || ||| Sbjct 1793447 TTTTCGCTCAACAACT---TGGCGTCTGTGCTTCCAGCAACGAACCACAAGAGTTCATGC 1793391 Query 20711 ACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAAG 20755 | | ||||| |||||||| ||||||||| | ||| || ||| Sbjct 1793390 ATAATTCCTCGAGAAAACACCTTCTTTGTGGTCAATAAAGGGAAG 1793346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372728276920