Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq2 132 1e-25
seq4 95.1 3e-14
>seq2
Length=2390349
Score = 132 bits (146), Expect = 1e-25
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330
|||| ||| ||||||||| || || ||||| | ||| || | |||||||| |||||
Sbjct 2169942 TGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACCGTCTTCCAATTGC 2170001
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| || |||||||| | ||||||||| | ||| || ||||| || || ||||| ||
Sbjct 2170002 TTACCAGCGAAGATTAAACGCTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTA 2170061
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
| || ||||| || |||| || || || || ||||| ||||| ||||| || |||
Sbjct 2170062 GACTTAACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTACCAGTC 2170121
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
| |||||||||||| || |||||
Sbjct 2170122 AAAGTCTTGACGAAAATTTGCAT 2170144
Score = 114 bits (126), Expect = 3e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330
|||| ||| ||| |||||||| || ||||| | || || | || ||||| |||||
Sbjct 2169417 TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCTTCCAATTGC 2169476
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| || |||||||||| | ||||| | ||| || ||||| || || ||||| ||
Sbjct 2169477 TTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTG 2169536
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
| || ||||| || |||| || || || ||||| || ||||| ||||| || |||
Sbjct 2169537 GACTTAACGTTGTCGATAGTGTCAGAGGACTCAACTTCAAGAGTGATAGTCTTACCAGTC 2169596
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
| |||||||||||| || |||||
Sbjct 2169597 AAAGTCTTGACGAAAATTTGCAT 2169619
Score = 109 bits (120), Expect = 1e-18
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330
|||| ||| ||| |||||||| || ||||| | || || | |||||||| |||||
Sbjct 2170170 TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGC 2170229
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| || ||||| |||| | ||||| | ||| || ||||| || || ||||| ||
Sbjct 2170230 TTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTG 2170289
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
| || ||||| || |||| ||| || || ||||| | || || ||||| || |||
Sbjct 2170290 GACTTAACGTTGTCGATAGTGTCGGAAGACTCGACTTCCAAGGTAATGGTCTTACCAGTC 2170349
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
| |||||||||||| || |||||
Sbjct 2170350 AAAGTCTTGACGAAAATTTGCAT 2170372
>seq4
Length=2182181
Score = 95.1 bits (104), Expect = 3e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | || || | |||||||| || || || || ||||||
Sbjct 2128816 TCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCTTCCAACTGCTTACCAGCGAAG 2128875
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||||| | ||| || ||||| || |||||||| || | || || ||
Sbjct 2128876 ATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGGATCTTGGACTTGACATTG 2128935
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| || || ||||| | || || ||||| || || | ||||||||||
Sbjct 2128936 TCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCTGTTAAAGTCTTGACG 2128995
Query 288463 AATATCTGCATTATG 288477
|| || |||||| ||
Sbjct 2128996 AAAATTTGCATTTTG 2129010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654203513814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |