Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2 132 1e-25 seq4 95.1 3e-14 >seq2 Length=2390349 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| ||||||||| || || ||||| | ||| || | |||||||| ||||| Sbjct 2169942 TGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACCGTCTTCCAATTGC 2170001 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || |||||||| | ||||||||| | ||| || ||||| || || ||||| || Sbjct 2170002 TTACCAGCGAAGATTAAACGCTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTA 2170061 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 | || ||||| || |||| || || || || ||||| ||||| ||||| || ||| Sbjct 2170062 GACTTAACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTACCAGTC 2170121 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 | |||||||||||| || ||||| Sbjct 2170122 AAAGTCTTGACGAAAATTTGCAT 2170144 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| ||| |||||||| || ||||| | || || | || ||||| ||||| Sbjct 2169417 TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCTTCCAATTGC 2169476 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || |||||||||| | ||||| | ||| || ||||| || || ||||| || Sbjct 2169477 TTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTG 2169536 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 | || ||||| || |||| || || || ||||| || ||||| ||||| || ||| Sbjct 2169537 GACTTAACGTTGTCGATAGTGTCAGAGGACTCAACTTCAAGAGTGATAGTCTTACCAGTC 2169596 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 | |||||||||||| || ||||| Sbjct 2169597 AAAGTCTTGACGAAAATTTGCAT 2169619 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| ||| |||||||| || ||||| | || || | |||||||| ||||| Sbjct 2170170 TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGC 2170229 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || ||||| |||| | ||||| | ||| || ||||| || || ||||| || Sbjct 2170230 TTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTG 2170289 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 | || ||||| || |||| ||| || || ||||| | || || ||||| || ||| Sbjct 2170290 GACTTAACGTTGTCGATAGTGTCGGAAGACTCGACTTCCAAGGTAATGGTCTTACCAGTC 2170349 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 | |||||||||||| || ||||| Sbjct 2170350 AAAGTCTTGACGAAAATTTGCAT 2170372 >seq4 Length=2182181 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || || | |||||||| || || || || |||||| Sbjct 2128816 TCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCTTCCAACTGCTTACCAGCGAAG 2128875 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||||| | ||| || ||||| || |||||||| || | || || || Sbjct 2128876 ATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGGATCTTGGACTTGACATTG 2128935 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || ||||| | || || ||||| || || | |||||||||| Sbjct 2128936 TCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCTGTTAAAGTCTTGACG 2128995 Query 288463 AATATCTGCATTATG 288477 || || |||||| || Sbjct 2128996 AAAATTTGCATTTTG 2129010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654203513814