Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 9e-14 >seq4 Length=2182181 Score = 93.3 bits (102), Expect = 9e-14 Identities = 174/253 (69%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | | || | |||||| | ||||||| | ||| | | Sbjct 398001 ATCATCACTGAGGCCGTCAAGATTGAGCAAGAATTCTTCACCGACGCTTTGCCA-GTCTC 398059 Query 243562 CTTATTGGC-ATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| |||| |||||| | || | ||| | || ||| |||||||||| |||||| | | Sbjct 398060 CTTGTTGGGTATGAACGCCGAGTTGATGTGCCAATACGTCGAATTCGTTGCCGACAGATT 398119 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 || || || | ||| | |||| || |||||| || ||||| || | ||| ||||| Sbjct 398120 ATTGATTGCTTTGGGTAACAAGAAGGTCTACAACGTCACCAACCCATTCGACTTCATGGA 398179 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACG 243740 ||| || | || || || ||||||||||| ||| | |||||||| || ||| Sbjct 398180 AAACATCTCTTTGGCTGGTAAGACCAACTTCTTCGAGAAGAGAGTCAGTGACTACCAAAA 398239 Query 243741 CCCTGGTGTGATG 243753 ||||||| ||| Sbjct 398240 GGCTGGTGTTATG 398252 Score = 91.5 bits (100), Expect = 3e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 297221 ATCAATCGCTTCACGTTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGAC 297280 |||||||| || | |||||| || | || | |||||| ||||||| ||||| || ||| Sbjct 1944551 ATCAATCGTTTGATGTTGTCAACCAAATCCATGGGATTGAAACTAGGAATATTCGTAGAC 1944610 Query 297281 CAACCGGTACCGATTCCACTCGAACCATTCACCAGAATGCTCGGAATAACAGGCACATAA 297340 ||||| |||||||| || | ||||||||||| | |||||| |||||||| || Sbjct 1944611 CAACCCGTACCGATACCTTCGGTACCATTCACCAATAGCATCGGAAGAACAGGCAAGTAC 1944670 Query 297341 TACTCTGGTTCGA 297353 | ||||| |||| Sbjct 1944671 CATTCTGGCTCGA 1944683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879816301550