Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 9e-17
seq2 87.8 2e-12
>seq4
Length=2182181
Score = 102 bits (112), Expect = 9e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | || ||||| ||||| ||| |||||| || || ||||| ||||
Sbjct 2128779 ACCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGA 2128838
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | |||| || | ||||||||||||||| || | || || ||||| | |||
Sbjct 2128839 AAGGGTTCTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGG 2128898
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||||||||| ||| || |||| | | | |||||| || || ||
Sbjct 2128899 AATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGAC 2128958
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
|| | || ||||| || || |||| ||||| || || |||||||||||
Sbjct 2128959 TTCCAAGGTAATGGTCTTACCTGTTAAAGTCTTGACGAAAATTTGCATTTT 2129009
>seq2
Length=2390349
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | || ||||| || | ||| || |||||||| ||||| ||||
Sbjct 2170373 ACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGA 2170432
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| | |||| || | |||||||||||||| || | || || ||||| | |||
Sbjct 2170433 AAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGG 2170492
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | |||||||| ||| || |||| ||| | | | ||||| || || |
Sbjct 2170493 AATACCTTCCTTGTCTTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCAGAGGACTCGA 2170551
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
| || | ||||| || || || |||| ||||| || ||||||||||||
Sbjct 2170552 CTTCAAGAGTGATAGTCTTACCTGTTAATGTCTTAACGAAGATTTGCATT 2170601
Score = 84.2 bits (92), Expect = 2e-11
Identities = 163/238 (68%), Gaps = 2/238 (1%)
Strand=Plus/Plus
Query 41972 AATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATT 42031
||||||| |||| ||||| || | ||| ||||| || | ||| |||||||| || ||
Sbjct 2169383 AATTTATTGACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTT 2169442
Query 42032 GTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTG 42091
||| |||| ||||| | | || || | |||||||||||||| || | || || ||
Sbjct 2169443 GTAGTCAGAAAGAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTG 2169502
Query 42092 GTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGC 42150
||| | ||| | | ||||||| | || | || | | | ||| | | | |||||
Sbjct 2169503 GTCAGGTGGAATACCTTCCTTGT-CTTGGATCTTGGACTTAACGTTGTCGATAGTGTCAG 2169561
Query 42151 TCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || || | ||||| || || || || | ||||| || || ||||||||
Sbjct 2169562 AGGACTCAACTTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2169619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212711727920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |