Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 172 5e-38 >seq4 Length=2182181 Score = 172 bits (190), Expect = 5e-38 Identities = 485/737 (66%), Gaps = 6/737 (1%) Strand=Plus/Plus Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964 |||||||||| || ||||| ||||| |||||||| |||||||| | | | |||| Sbjct 350052 TGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCCATGAAGG 350111 Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024 |||||| || || |||| ||| | | | ||| |||||| || || || | Sbjct 350112 ACGACTCTATTGATGGTATTTACGATACCTTGAAGACCTGTGCCTTGATTTCCAAGAGTG 350171 Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTA 94084 | || || || || | | ||| || | ||| ||| ||| | ||||| |||| Sbjct 350172 CTGGTGGTATTGGTTTGCACATTCACAACATCCGTTCCACTGGTGCTTACATTGCTGGTA 350231 Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144 | ||||| ||||| ||||| | | || ||| | || |||||||||||| | || | | Sbjct 350232 CTAATGGTACCTCGAACGGTATTATTCCAATGGTTCGTGTCTTCAACAACACTGCTAGAT 350291 Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204 |||| ||||| |||||| | | | ||| |||| || | || | ||||| |||| Sbjct 350292 ACGTTGACCAAGGTGGTAACAAGCGTCCAGGTGCTTTTGCCTTGTACTTGGAGCCATGGC 350351 Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGG 94264 |||| ||| | | ||||| ||| | ||||||| ||||| || || || | Sbjct 350352 ACGCAGACATCTTCGACTTCATTGACATCAGAAAGAATCACGGTAAGGAAGAAATCAGAG 350411 Query 94265 CCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAA 94324 |||||||| | ||| ||| | ||| | ||||| | || ||||| | ||||| ||| Sbjct 350412 CCAGAGACTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATGAAGAGAGTCGAACAAA 350471 Query 94325 ACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGAT 94384 || | |||| |||||| | ||| || ||| ||| || || | || |||| || | Sbjct 350472 ACGGTGATTGGACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAAGTTTACGG-T 350530 Query 94385 CGCG-TTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCCAGGAAGGTTAT 94442 || || || || || || | |||||||| | | ||| ||| || || | | Sbjct 350531 GACGAATTCGAGGAGTTATACGAACGTTACGAGAGAGAAGGAAGAGG-TAGAAACACTGT 350589 Query 94443 GGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTA 94502 | ||| ||| ||||| | ||| |||| | ||| || || ||||| || | Sbjct 350590 CAAGGCTCAAAAGTTGTGGTACGCTATCTTGGAAGCTCAGACTGAAACCGGTACTCCTTT 350649 Query 94503 CATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCA 94561 ||| |||| |||||| |||| ||| ||| ||||||| || || | || | |||| Sbjct 350650 CATGTTGTACAAGGATGCCTGT-AACAAGAAGACCAACCAAAAGAACTTGGGTATAATCA 350708 Query 94562 AGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGT 94621 || || || |||| ||||| || ||||| | ||||| || || ||||||| | Sbjct 350709 AGTCTTCTAACTTGTGTTGTGAGATCGTTGAGTACTCCTCTCCAGAAGAAGTTGCTGTCT 350768 Query 94622 GTAACCTGGGCTCCATC 94638 ||||| ||| ||| ||| Sbjct 350769 GTAACTTGGCCTCGATC 350785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723119607480