Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4 178 2e-39 seq6 86.0 8e-12 >seq4 Length=2182181 Score = 178 bits (196), Expect = 2e-39 Identities = 900/1410 (64%), Gaps = 47/1410 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||| | ||||||||||| || || || ||||||||||||||||||| || || Sbjct 351321 TAGATGTTAGAGGTGTATGGCTCGAAACATTCGTTGTTACCCAAGATTTGGGAGGTAGAA 351262 Query 115963 GCTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTGCGGAGACCCACCCC--CCTAATGCGT 116019 || || ||||| || || | | | |||| ||| | | ||| | || | | | Sbjct 351261 GCAGTTGGCATTGGAGCAACTAATAAGGA-GTTTCTCAAACCGTGCTTGGCCAACTT--T 351205 Query 116020 TCCTTGAGGGCGTCCCAGTCGTAGT--TGAGCTTTGTCTCCCCCTCCCACATATCAAACT 116077 | ||| | ||| ||||| || | | || ||| || | |||||||| ||||| | Sbjct 351204 TGCTTCAAGGCATCCCAATCCCACAACTCAG--TTGGCTTTCTCTCCCACAAGTCAAATT 351147 Query 116078 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 116137 | | | ||||| || ||||| || ||||| | | || || || || || | | Sbjct 351146 GCAACAAGCCTTGAGATGCTGGAGAACCCTCGTAAGATTCGTAAGGACCTTCTTCAGAAG 351087 Query 116138 CCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCAT 116194 | || || ||| || |||| ||| |||| || || ||||| ||||| || || Sbjct 351086 CTAACTCAATAGAG---GCTTCGACGGCACCGTGGTAGATAGTCTCGAAAATTTGAATAT 351030 Query 116195 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGA 116254 | | | | | || || | || || || | | | | || || ||| || | Sbjct 351029 TTAATTCTCTAGCTTCTTGAGAGTCGAATGGTAATCTCAATGCCATGAAAGTATCAGCCA 350970 Query 116255 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTCC 116313 |||||| ||||| | | ||||||| | || ||| | ||||| || ||| || ||| Sbjct 350969 AACCTTGAACACCCAAGGCAATTGGTCTATTTCTTTTGTTAGATCTCTCG-GCT-TCTGG 350912 Query 116314 A-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 116372 | | || || | || || ||||| | | | || | || ||||||| ||| |||| Sbjct 350911 AACTGGGTAGTAGTTTCTGTCGATGATCTTGTTCAAGTTACGGGTGACAGACTTAGTGAC 350852 Query 116373 TTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAG-----GA 116427 ||| || | ||| ||| | | | | || || |||| | | || || || Sbjct 350851 TTCGTGCAACTTCTCGAAGTTGTACCACAAAGACTTGTCAT---CCTTCTCAGCGAAAGA 350795 Query 116428 AGG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 116483 || ||||| || |||| ||||| |||| || || | | |||||| | Sbjct 350794 TGGCAAAGCGATCGAGGCCAAGTTACAGACAGCAACTTCTTCTGGAGAGGAGTACTCAAC 350735 Query 116484 AATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT 116543 || || |||||| || ||| ||| || | |||||||||||||| || | ||| | Sbjct 350734 GATCTCACAACACAAGTTAGAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTT 350675 Query 116544 GTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 116603 |||||| ||||||||||| | ||| | || || || || || || || | | | || Sbjct 350674 GTTACAGGCATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCTTCCAAGAT 350615 Query 116604 AGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACT 116662 ||| | ||| | | | | | || | |||||| | ||| || || |||||| Sbjct 350614 AGCGTACCACAACTTTTGAGCCTTG-ACAGTGTTTCTACCTCTTCCTTCTCTCTCGTAAC 350556 Query 116663 TTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTG 116722 | ||| | |||| || || ||||| | | |||| | ||||| || | | || Sbjct 350555 GTTCGTATAACTCCTCGAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTG 350496 Query 116723 GACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 116782 || |||| |||| ||| | ||| | || || | ||||||||| | ||||| |||| Sbjct 350495 GAGAGAAAAGAGTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAATCTGGAATCC 350436 Query 116783 AGAGCGCCGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 116841 | | || | ||| | || | | | || |||||| | || ||||| | | Sbjct 350435 ACAAAGCTGGGAACAAGTCTCTGGCTCTGAT-TTCTTCCTTACCGTGATTCTTTCTGATG 350377 Query 116842 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTG 116901 || | ||||| | ||| || |||||||| || |||| ||||| || | | || || Sbjct 350376 TCAATGAAGTCGAAGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAGCACC--TG 350319 Query 116902 CGACG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATT 116955 |||| |||| | |||| || || || || || ||| || || |||| |||| Sbjct 350318 -GACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCATT 350260 Query 116956 GGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGAC 117014 ||||| ||||| | || ||||| || || ||| || || || || | || Sbjct 350259 GGAATAATACCGTTCGAGGTACCATTAGTACCAGCAATGTAAGCACCAGT-GGAACGGAT 350201 Query 117015 ATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAG 117074 | ||| ||||||| ||||||||| || || | ||| || || || || | | | Sbjct 350200 GTTGTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAA 350141 Query 117075 ACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACAT 117134 | |||| || ||||| || ||||| |||| | |||| ||||| || ||||| Sbjct 350140 GGTATCGTAAATACCATCAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACAT 350081 Query 117135 TTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG 117194 |||||| ||| |||||||||||||| | ||||| | ||||| |||| | || ||| Sbjct 350080 TTGTGGAGATGGGGTACCAGCGTTGAACAAAGTTGGAGAACCGTGGGTGAAGAAACGTTG 350021 Query 117195 GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254 |||||| | || | || | ||| |||||| || ||||||||||| || || Sbjct 350020 AGACATCAAGTTATAAGATTCAATGACCTTCTCAATGTCGTCACCGTGAATACCAATAGA 349961 Query 117255 GACCCGCATAAACATGTATTGGGGTGTTTC 117284 || | ||| | || | ||| ||| |||| Sbjct 349960 AACTCTCATGATCAAATGTTGTGGTCTTTC 349931 >seq6 Length=1594198 Score = 86.0 bits (94), Expect = 8e-12 Identities = 142/203 (70%), Gaps = 9/203 (4%) Strand=Plus/Plus Query 12789 TCGAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCG 12848 ||||| |||||||| || ||| | ||| || | || |||||| |||||||| || Sbjct 87989 TCGAAACCATCCATTTCGACCAATAATTGGTTCAAAGTAGTTTCACGCTCATCATTAGCA 88048 Query 12849 -----GGCAT-ACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAA 12902 ||||| ||| || || |||| ||||| | ||| ||||| || |||| ||| Sbjct 88049 CCACTGGCATTACCCTTCGAAC---GTTGTTTACCAATGGCATCAATCTCATCAACAAAA 88105 Query 12903 ACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCG 12962 || ||| | || |||||||||||| | ||| | || |||||||| ||||| Sbjct 88106 ACAATAGAAGGAGCATTTTCACGGGCGGTCTTAAACAAGTCACGCACTCTGGATGCACCA 88165 Query 12963 ACACCCACAAACATCTCCACAAA 12985 ||||| |||||||| || ||||| Sbjct 88166 ACACCAACAAACATTTCGACAAA 88188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507100305080