Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq4 120 3e-22 seq2 98.7 1e-15 >seq4 Length=2182181 Score = 120 bits (132), Expect = 3e-22 Identities = 554/869 (64%), Gaps = 20/869 (2%) Strand=Plus/Minus Query 132581 CCTTGGCAAACATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAG 132640 ||||||| ||| || ||| ||||| || || | || | ||||| || || || | Sbjct 398259 CCTTGGC---CATAACACCAGCCTTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTGG 398203 Query 132641 TTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAG---T 132697 | || || |||| || ||| ||| || || || ||||||| ||||||| | Sbjct 398202 TCTTACCAGCCAAAGAGATGTTTTCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCT 398143 Query 132698 GCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACA 132757 |||| | || | || | | | | |||||||| ||||| |||| |||||| ||| Sbjct 398142 TCTTGTTACCCAA-AG--CAATCAATAATCTGTCGGCAACGAATTCGACGTATTGGCACA 398086 Query 132758 TGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCT 132817 | ||| || | |||| || || |||| || ||||||| || ||||| Sbjct 398085 TCAACTCGGCGTTCATACCCAACAAGGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCT 398026 Query 132818 CGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCG-CTCGGCCGTTGCACC 132876 | || ||| || || |||| ||| | | ||| | | | || | | ||| | Sbjct 398025 CAATCTTGACGGCCTCAGTGATGATCTTCTCAACAATAACTGGGTCTGGTCTGTTTTGC- 397967 Query 132877 AAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGT 132936 || || ||| | ||| || || ||||| ||||| || || || ||| | || | Sbjct 397966 AAGTGGGAGAATAACAAACAGGCGAAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAAC 397907 Query 132937 TCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCG 132996 ||||| ||||||||| || ||||| | || | || || | ||| || |||| ||| Sbjct 397906 TCGTTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCG 397847 Query 132997 AAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAAC 133056 ||| || ||||| | || || ||||| || ||||| || | | || |||||| Sbjct 397846 AAAGAACCACTGAAGAAAATACCTTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAAC 397787 Query 133057 GTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGC 133116 ||| || | | |||||| | || ||||| || ||||| | | ||| ||| || Sbjct 397786 AAGGCCTCATCATCAGAGATCCATCTCAAAGCCCAATCAGCCTTCTTTCTGATGCATGGA 397727 Query 133117 ATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCG-AGGAACGC--ACGTAGGTG 133173 || | || |||||||| || | ||| | ||||| ||| | ||||| ||| Sbjct 397726 ATGTTGTCAATGGCGTTGAAAA---GGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTG 397670 Query 133174 TCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAA 133233 || || | || || | || ||||| | ||| ||||| |||||| || ||||| Sbjct 397669 TCAATTAACAAAGAGTAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGGAAACCGTAG 397610 Query 133234 AAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTG 133293 || ||| || || | || ||||| || ||| |||||||| || |||||| Sbjct 397609 AAACACTTGGCTTCTGGGATTTGGACTTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTG 397550 Query 133294 ACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTG 133353 ||||| ||||| ||||||||| || |||| | | ||||| | | ||||| Sbjct 397549 ACGATACCGTCAGAGGCGGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTC 397490 Query 133354 TCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTC 133410 | ||| || | | | |||||| || ||||| || ||| | || || | ||| Sbjct 397489 TTGTTTAACTTGTGGTTCCAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCAGCAGTC 397430 Query 133411 CAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || || || || || || || |||||||| Sbjct 397429 CAGAAGGAAGCTTCAGCCTTCTTGTACAT 397401 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| ||||| || || | || || || ||||| ||| | || |||||| || Sbjct 2129009 AAAATGCAAATTTTCGTCAAGACTTTAACAGGTAAGACCATTACCTTGGAAGTCGAGTCC 2128950 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | | | | | || || |||| ||||| || || ||||| | ||| Sbjct 2128949 TCCGACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCTGAC 2128890 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| | | || | ||| || || ||| |||| |||| | ||||| |||||| Sbjct 2128889 CAACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACCCTTTCTGACTAC 2128830 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| ||||| | || |||| ||||| | | |||||||| || Sbjct 2128829 AACATCCAGAAGGAGTCCACCTTGCACTTGGTCTTAAGATTGAGAGGTGG 2128780 >seq2 Length=2390349 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || || ||||| ||| | || |||||| | || Sbjct 2170372 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCTTCC 2170313 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| || |||| ||||| || || ||||| | ||||| Sbjct 2170312 GACACTATCGACAACG-TTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 2170254 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | |||| ||| || || || |||| |||| | || || |||||||| Sbjct 2170253 ACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAA 2170194 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || ||||| | | |||||||| || Sbjct 2170193 CATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 2170146 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || || ||||||||| |||| || ||| | | Sbjct 2170144 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACCATCACCCTCGAGGTTGAGTCTTCT 2170085 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| || |||| ||||| || || ||||| | ||||| Sbjct 2170084 GACACTATCGACAACG-TTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 2170026 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| || || || |||| |||| | || ||| |||||||| Sbjct 2170025 ACAGCGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTCTCTGACTACAA 2169966 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||| ||||| ||| | || || || ||||| Sbjct 2169965 CATTCAAAAAGAATCCACTCTTCACTTGGT 2169936 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 38237 TaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA 38296 ||| | ||||||||| ||||| || || | || || || || ||||| | || ||||| Sbjct 2170607 TAATACAATGCAAATCTTCGTTAAGACATTAACAGGTAAGACTATCACTCTTGAAGTCGA 2170548 Query 38297 GGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCG 38355 | || | |||| | | | |||| | || || |||| ||||| || || ||||| Sbjct 2170547 GTCCTCTGACACCATTGACAACG-TCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCAC 2170489 Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415 | |||||||| | | |||| ||| || || || |||| |||| | || || | Sbjct 2170488 CTGACCAACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTG 2170429 Query 38416 ACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||| ||||| ||| | || || || ||||| | | |||||||| || Sbjct 2170428 ACTACAACATTCAAAAAGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 2170374 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || || || ||||| | || || ||| || | Sbjct 2169619 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATCACTCTTGAAGTTGAGTCCTCT 2169560 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| || |||| ||||| || || ||||| | ||||| Sbjct 2169559 GACACTATCGACAACG-TTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 2169501 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | ||| || || || |||| || | | || || |||||||| Sbjct 2169500 ACAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTCTTTCTGACTACAA 2169441 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || ||||| || | |||||||| || Sbjct 2169440 CATCCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 2169393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172718721920