Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq8 168 3e-36 seq5 138 4e-27 seq2 136 2e-26 seq6 107 8e-18 >seq8 Length=1108550 Score = 168 bits (186), Expect = 3e-36 Identities = 846/1322 (64%), Gaps = 43/1322 (3%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 |||||||| | ||| | || | | || || || || ||||| || | || |||||| Sbjct 488816 GGAAAGCCTAACATTGAGGTTGAGTTCAAGGGCGAGACCAAAACCTTCACACCAGAAGAA 488875 Query 451253 ATTTCATCTATGGTTCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCC 451311 || || || ||| | ||| | || ||||| ||||| || ||| || |||| || | Sbjct 488876 ATCTCGTCCATGAT-CTTGGTCAAGATGAAGGAAACCGCTGAAAGTTACCTTGGATCCAC 488934 Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 | | ||||||||||| ||||||| || ||||| ||||| ||| |||| | ||||| || Sbjct 488935 AATCACTGATGCAGTTGTTACTGTCCCTGCTTACTTCAACGATTCACAGAGACAAGCCAC 488994 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 ||||| || || | ||||||||||| ||||| | |||||||||| ||||| || || Sbjct 488995 CAAAGACGCTGGTCTCATTGCTGGTTTGAATGTGTTGAGAATTATTAACGAACCAACTGC 489054 Query 451432 AGCTGCTCTAGCATA-----TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATT 451486 || ||| | || || ||||| | ||| | |||| | | ||| | ||| | Sbjct 489055 CGCCGCTATCGCTTACGGTTTGGAC-AAGAAGGGCCAAAG-CGCTCATGAACAGAATGTA 489112 Query 451487 TTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGG 451546 || | || || || || || || || |||| || || | | ||||| || || Sbjct 489113 TTGATCTTCGACTTGGGAGGTGGTACCTTTGATGTGTCGTTATTGGCCATTGACGAAGGT 489172 Query 451547 GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 | || ||||| ||||| || ||||||||||| | |||||||||||| | || || Sbjct 489173 ATTTTCGAAGTCAAGGCTACTGCCGGTGATACTCACTTGGGAGGTGAAGATTTCGACAAC 489232 Query 451607 GCAATTGTGGAATGGTTGAAAACTGATGTTCAACGAAAACTAAAAGTA-GATATTTCTAC 451665 | || | || | ||||| |||||| ||| | ||| | || | || | Sbjct 489233 CGTTTGGTTAACCACTTCATGACTGA-GTTCAAGAGAAAGCACAAGAAGGACTTATCGAG 489291 Query 451666 TAACCAAAAAGCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAA-----TTACA 451720 ||||| | ||| |||||| | | | ||| | |||| ||| || | || Sbjct 489292 CAACCAGAGAGCTCTTAGAAGATTGAGAACCGCTTGTGAAAGAGCCAAGAGATCCTTGTC 489351 Query 451721 CTCAGTTCAACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTAT 451780 ||| ||| |||||||| | || | ||||| | | || || || || | Sbjct 489352 CTC--GTCAGCACAAACTTC---GATTGAGATTGACTCTCTTTACGAGGGTATTGA--CT 489404 Query 451781 GCTACTACTC--TTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACGGG 451838 |||| ||| |||| | || ||||| | ||| || | || | || Sbjct 489405 TCTACACCTCCATTACAAGAGCCCGTTTTGAGGAGTTGTGTGCC--GACTTATTCAGATC 489462 Query 451839 TA--ATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGA 451896 || | | || ||||| |||| | | ||| |||| || ||| | || || | Sbjct 489463 TACCTTAGACCCAGTTGAGAAAGTTCTCAAGGATGCTAAGCTTGATAAGTCTCAAGTTCA 489522 Query 451897 TGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTC 451956 || || || | || || ||||||||| |||||||||| |||| ||| | | || ||| Sbjct 489523 CGAGATCGTCTTGGTTGGTGGTTCTACAAGAATTCCTAAGATTC-AGA-AGCTCGT-TTC 489579 Query 451957 TTATTT-TGGA--GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATA 452013 | |||| | | ||||| | | | ||| | || || |||||||| || || || Sbjct 489580 TGATTTCTTCAACGGAAAGGAGCCAAACAAGTCTATCAACCCAGATGAAGCCGTCGCCTA 489639 Query 452014 TGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT-TCAGATGATGAAA-AATTAGGAGAT 452071 |||||||||||||||||||||||| | |||||| || | | ||| | |||| | Sbjct 489640 CGGTGCTGCAGTTCAAGCAGCTATTTTGACAGGTGACACCTCCTCAAAGACACAGGACTT 489699 Query 452072 ATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATG 452131 | | ||| | ||||| | || | || | || |||| || || ||||| | ||| Sbjct 489700 GT--TATTATTGGATGTTGCTCCATTGTCATTAGGTATTGAGACCGCAGGTGGTGTTATG 489757 Query 452132 ACTAATTTAATTAAACGAGGAA--CTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTA 452189 || || || ||| | ||||| | | ||||| || ||| | | | || || Sbjct 489758 ACCAAATTGATT--CCAAGGAATGCCACCATTCCAACCAAGAAGTCTGAGATTTTCTCTA 489815 Query 452190 CAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGA 452249 | ||| |||||||||||||| || ||||| |||||||| ||| | |||| | Sbjct 489816 CTTTTGCTGACAACCAACCAGGTGTTTTGATCCAAGTTTTTGAAGGTGAAAGAGCAAGAA 489875 Query 452250 CACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGG 452309 || || || || | || | ||| | ||||| ||| ||||| | Sbjct 489876 CAAAGGACAACAACTTGTTGGGTAAGTTTGAGTTGAGTGGTATTCCACCTGCTCCAAGAG 489935 Query 452310 GAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTG 452369 || || ||||||||| |||| | ||| | |||||||| ||||| | ||||| || Sbjct 489936 GAGTCCCACAAATTGAAGTTACATTCGATATCGATGCAAACGGTATCTTGAATGTCTCTG 489995 Query 452370 CAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTT 452429 | | ||||| | || || | |||| ||||| ||||| || || || | | Sbjct 489996 CCTTAGAAAAGGGTACAGGTAAGACTCAAAAGATTACTATTACCAACGACAAGGGTAGAT 490055 Query 452430 TATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATG 452489 | ||||| |||||||| || | |||||| || || ||||| | ||||| || |||| Sbjct 490056 TGTCTAAGGAAGATATCGAGAGAATGGTCTCCGAGGCTGAAAAGTATAAGGAAGAGGATG 490115 Query 452490 AA 452491 || Sbjct 490116 AA 490117 >seq5 Length=1741095 Score = 138 bits (152), Expect = 4e-27 Identities = 280/414 (68%), Gaps = 5/414 (1%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 |||||||| | || ||||| | || || ||||| || || || |||| |||||| Sbjct 712995 GGAAAGCCAAACATCCAAGTTGAGTACAAGGGTGAGACCAAGGTCTTCACTCCAGAAGAA 712936 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || ||| ||||| |||| ||||| || || || || | | ||| | Sbjct 712935 ATCTCCTCCATGATTCTTTCTAAGATGAAGGAGACCGCTGAGGGTTTCCTCGGTACCAAG 712876 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | ||||| || | ||||| || ||||| ||||| || | ||| | ||||| || Sbjct 712875 GTCAACGATGCCGTTGTCACTGTCCCAGCTTACTTCAACGACTCCCAAAGACAAGCTACC 712816 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | |||||||||||||| ||| | |||||||||| || || || || Sbjct 712815 AAGGATGCTGGTCTCATTGCTGGTTTAAACGTTATGAGAATTATTAACGAGCCAACCGCC 712756 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA-GAAGaaaaaaaTATTTTAGT 451491 ||||| | || || || || | | | |||| | ||||| || || || | | Sbjct 712755 GCTGCCATTGCCTACGGTCTTG----ACAAGAAGACTGAGGAAGAGAAGAACGTTCTTAT 712700 Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATT 451551 || || || |||||||| ||| ||| || || | || || ||||| || | || Sbjct 712699 CTTCGACTTGGGTGGAGGTACTTTCGATGTCTCCTTATTGTCTATCGAAGACGGTATCTT 712640 Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| || |||||| ||||| | || ||||||||| | || || Sbjct 712639 CGAGGTCAAGGCCACTGCTGGTGACACTCACTTGGGTGGTGAAGATTTCGACAA 712586 Score = 89.7 bits (98), Expect = 2e-12 Identities = 322/501 (64%), Gaps = 2/501 (0%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTT-C 452049 || || ||||| |||||||| || |||||||| || ||||| ||||| | | ||| | Sbjct 712200 AACCCAGATGAGGCTGTTGCCTACGGTGCTGCTGTCCAAGCCGCTATCTTGTCCGGTGAC 712141 Query 452050 AGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | | | || | ||| | || | | ||||| | || | |||||||| | Sbjct 712140 ACTTCTTCTAAGACCCA-AGACTTGTTGCTTTTGGATGTTGCTCCATTGTCTCTTGGTAT 712082 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 ||| || |||||||| || ||||| || || || | || || |||| || || Sbjct 712081 TGAGACTGCTGGTGGTATCATGACCAAGTTGATCCCAAGAAACTCTACTATCCCAACCAA 712022 Query 452170 AAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTT 452229 ||| | || || ||| ||| |||||||||||||| |||||||| || Sbjct 712021 GAAGTCCGAGACTTTCTCTACTTACGCTGACAACCAACCAGGTGTCTTGATTCAAGTCTT 711962 Query 452230 TGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAA 452289 ||||| ||| | || | |||| || || || |||| | || ||||| Sbjct 711961 CGAAGGTGAAAGAGCTAAGACAAAGGACAACAACTTGTTAGGTAAGTTCGAACTTTCTGG 711902 Query 452290 CATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAA 452349 || || || ||||| || ||| ||||| ||| | |||| || ||||||| || Sbjct 711901 TATCCCACCAGCCCCAAGAGGTGTTCCACAAATCGAAGTCACCTTCGACATTGATGCCAA 711842 Query 452350 TGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAAT 452409 ||||||| | || || ||| | ||||| | || || | |||| ||||| || Sbjct 711841 TGGTATTTTGAACGTCTCTGCCCTCGAAAAGGGTACCGGTAAGACTCAAAAGATTACCAT 711782 Query 452410 TACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGA 452469 ||| || || || | ||||| || ||||| || || || ||||| || || || Sbjct 711781 TACCAACGACAAGGGTAGATTATCCAAGGAAGACATCGAGAAGATGGTTTCCGAGGCTGA 711722 Query 452470 AAAATTCAAGGATGATGATGA 452490 || |||||||| || ||||| Sbjct 711721 GAAGTTCAAGGAGGAAGATGA 711701 >seq2 Length=2390349 Score = 136 bits (150), Expect = 2e-26 Identities = 278/405 (69%), Gaps = 11/405 (3%) Strand=Plus/Plus Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264 ||||||||| |||| ||| |||||| | |||||| || |||||||| ||| ||||| Sbjct 50195 ATTCAAGTATATTACAAAAATGAAACAAGGTATTTTGCACCAGAAGAAATATCAGCTATG 50254 Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || | | ||||||||| ||||||| ||| ||||| | | || |||||| Sbjct 50255 ATTTTGTCCAAAATGAAATCCTCAGCAGAGGCATACGTTGGTACAAACATCACAGATGCA 50314 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || | |||||||| || || ||||| ||||| ||| | |||||||| | ||||| || Sbjct 50315 GTTGTCACTGTTCCAGCCTACTTCAACGATGCTCAAAGACAAGCAACAATGGATGCTGGG 50374 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTA-TTAATGAACCTACAGCAGCTGCTCTAGC 451443 ||| || || || ||| | || | || |||||||||| || ||||| || || || Sbjct 50375 TCTATAGCAGGATTGAATATA-TTGAAGGTACTTAATGAACCAACTGCAGCAGCACTTGC 50433 Query 451444 ATATGGACTAGGAAAATCAAAAGAAACAGAA-GaaaaaaaTATTTTAGTATTTGATTTTG 451502 ||||| || ||| | |||| || || ||| | || | || | || || | Sbjct 50434 CTATGGTCTC----AATAATAAGATTAAGCGCGAGAAATACGTTCTTGTTTACGACTTAG 50489 Query 451503 GTGGAGGAACTCATGATACTTCTGTACTTTCAAT-TGAAGATGGGGT-ATTTGAAGTAAA 451560 |||| ||||| ||| ||| | ||| || | || |||| | |||||||||||| Sbjct 50490 GTGGTGGAACGTTCGATG--TCTCCATTTTGAAAATTAAACTGGGTTCATTTGAAGTAAA 50547 Query 451561 GGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | ||| ||||||| | | ||||||| || ||| ||||||| Sbjct 50548 ATCGACCTCTGGTGATGGTTACTTAGGAGGCGAGGATTTTGATAA 50592 >seq6 Length=1594198 Score = 107 bits (118), Expect = 8e-18 Identities = 276/417 (66%), Gaps = 14/417 (3%) Strand=Plus/Minus Query 451187 CAAAAAGGA----AAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGC 451242 ||||||||| ||||| | || | || | || || ||||| || || || | Sbjct 291004 CAAAAAGGATGGTAAGCCAGTTGTTAAGGTTGAGTACAATGGTGAGGAAAAGACCTTCTC 290945 Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTAC-TAAAATGAAAGAAACAGCAGAACAATATA 451301 ||| |||||||| || |||| | |||| ||| ||||| | | || ||| |||| Sbjct 290944 TCCAGAAGAAATCTCTGGTATGAT-CTTAGGTAAGATGAAGAACATCGCCGAAGAATACT 290886 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || ||||| | || || | |||||||| ||||| ||||| ||||| ||| Sbjct 290885 TGGGCAAGAAGGTTACCCACGCCGTCGTCACTGTTCCAGCTTACTTCAACGATGCCCAAA 290826 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||| || || || ||||| ||||||||||| |||||| | ||||| |||| | Sbjct 290825 GACAAGCCACCAAGGACGCAGGTACCATTGCTGGTTTGAATGTTTTGAGAATTGTTAACG 290766 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA-GAAGaaaaa 451480 | || || || ||||| | || || ||| ||| | |||| | | ||||| Sbjct 290765 AGCCAACCGCTGCTGCCATTGCCTACGGATTAG-------ACAAGACTGATGGTGAAAAG 290713 Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAA 451540 | || | || | ||||| ||||||||||| ||| ||| | | || ||||| Sbjct 290712 CAAATCATTGTTTACGATTTGGGTGGAGGAACCTTCGATGTTTCCTTGTTGTCCATTGAG 290653 Query 451541 GATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 | ||| || || ||||| ||| || ||||| ||||| | || ||||||||| Sbjct 290652 GGTGGTGTTTTCGAAGTCTTGGCTACTGCCGGTGACACTCACTTGGGTGGTGAAGAT 290596 Score = 87.8 bits (96), Expect = 7e-12 Identities = 190/284 (67%), Gaps = 8/284 (3%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || | || ||||| || |||||||||||||| ||||||| ||||| ||| || Sbjct 1388121 ATGCCGTTGTGACGGTTCCAGCATATTTCAATGATGCCCAACGGCTGGCAACCAAAAATT 1388062 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | ||| | | | || || |||| ||| || | | || ||||| || ||||| || Sbjct 1388061 CTGGAAAGTTGGTAGGCTTGGATGTACTTAGAGTAGTGAACGAACCCACCGCAGCCGCAT 1388002 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTA-TTTTAGTATTTGAT 451498 | || |||||| ||| | ||||| || ||| | ||| | || ||||| Sbjct 1388001 TGGCGTATGGAATAG-------ATAAGAAGCAAAAGGACGGGATAGTGGCTGTGTTTGAC 1387949 Query 451499 TTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTA 451558 || || ||||| || ||| | || | | ||||||||||| || || || || Sbjct 1387948 TTGGGAGGAGGTACGTTTGACATATCAATTTTGGATATTGAAGATGGCGTTTTCGAGGTC 1387889 Query 451559 AAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 | || ||||| ||| | || ||||| || || ||||| |||| Sbjct 1387888 AGAGCTACCAACGGTAACACCCATCTCGGTGGAGAAGACTTTGA 1387845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718070919404