Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 232 8e-56 >seq4 Length=2182181 Score = 232 bits (256), Expect = 8e-56 Identities = 1130/1761 (64%), Gaps = 69/1761 (4%) Strand=Plus/Plus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| ||||| | || ||||| | || | || ||||| || || || || ||||| Sbjct 349931 GAAAGACCACAACATTTGATCATGAGAGTTTCTATTGGTATTCACGGTGACGACATTGAG 349990 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACC 111725 || | || | || || |||||| | || | |||| ||||| | ||||| Sbjct 349991 AAGGTCATTGAATCTTATAACTTGATGTCTCAACGTTTCTTCACCCACGGTTCTCCAACT 350050 Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785 | |||||||||||||| ||| || |||||||| |||||||||| | || | ||| Sbjct 350051 TTGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCCATGAAG 350110 Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAA 111841 || || || || |||| ||||||| || || |||| |||||| || || || Sbjct 350111 GACGACTCTATTGATGGTATTTACGATAC-CT---TGAAGACCTGTGCCTTGATTTCCAA 350166 Query 111842 GTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTA 111900 | | ||||||||||| || ||||||| || | || | || || || || ||| Sbjct 350167 GAGTGCTGGTGGTATTGGTTTGCACATTCACAACATCCGTTCC-ACTGGTGCTTACATTG 350225 Query 111901 GAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 111960 ||||| |||||| || | ||||||||||||||| |||| || || ||| ||| | Sbjct 350226 CTGGTACTAATGGTACCTCGAACGGTATTATTCCAATGGTTCGTGTCTTCAACAACACTG 350285 Query 111961 CGCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTG 112014 | | || || |||||| ||| ||||| || || || | || | || | | Sbjct 350286 CTAGATACGTTGACCAAGGTGGTAACAAGCGTC-CA--GGTGCTTTTGCCTTGTACTTGG 350342 Query 112015 AGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGG 112074 ||||||||||||| || ||| | || ||| |||| | | || || ||| | || | Sbjct 350343 AGCCATGGCACGCAGACATCTTCGACTTCATTGACATCAGAAAGAATCACGGTAAGGAAG 350402 Query 112075 AGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGA 112133 | | | ||| | || | ||| | ||| | |||||||||||| | |||||||||||| Sbjct 350403 A-AATCAGAGCCAGAGACTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATGAAGAGA 350461 Query 112134 GTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGAT 112193 || || | | || ||||| |||| || | |||| || | || || || | | || Sbjct 350462 GTCGAACAAAACGGTGATTGGACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAA 350521 Query 112194 GCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACT 112253 | ||||| || || || | | ||| | |||||| |||| | | | | Sbjct 350522 GTTTACGGTGACGAATTCGAGGAGTTATACGAACGTTACGAGAGAGAAGGAAGAGGTA-- 350579 Query 112254 GCGACGGTGCCA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 112311 | || || || ||| | ||||| | ||||| | | |||| || || || | Sbjct 350580 GAAACACTGTCAAGGCTCAAAAGTTGTGGTACGCTATCTTGGAAGCTCAGACTGAAACCG 350639 Query 112312 GTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 112371 |||| || | ||| | ||||| || ||||||||| | |||| || |||||||| |||| Sbjct 350640 GTACTCCTTTCATGTTGTACAAGGATGCCTGTAACAAGAAGACCAACCAAAAGAACTTGG 350699 Query 112372 GTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 112431 || | |||||| ||| ||| | ||| || ||| | || | | ||| || Sbjct 350700 GTATAATCAAGTCTTCTAACTTGTGTTGTGAGATCGTTGAGTACTCCTCTCCAGAAGAAG 350759 Query 112432 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAG 112490 ||||| |||||| | || || |||||| | || | | || || ||| ||| Sbjct 350760 TTGCTGTCTGTAACTTGGCCTCGATCGCTTTGCCATCTTTCGCTGAGAAGGATGAC-AAG 350818 Query 112491 ACATT-TG-----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTA 112544 | || || | | || || | |||||||| || || ||||||| ||| | Sbjct 350819 TCTTTGTGGTACAACTTCGAGAAGTTGCACGAAGTCACTAAGTCTGTCACCCGTAACTTG 350878 Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAG 112603 |||| | || || ||||| | ||||| ||| ||| || | |||||| | || Sbjct 350879 AACAAGATCATCGACAGAAACTACTACCCAGTTCCAGA-AGCCGAGAGATCTAACAAAAG 350937 Query 112604 ACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCC 112662 | | | ||||||| | ||||| |||||| | || ||| ||||| | ||| Sbjct 350938 AAATAGACCAATTGCCTTGGGTGTTCAAGGTTTGGCTGATACTTTCATGGCATTGAGATT 350997 Query 112663 ACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATC 112722 || |||| || || | ||||| | ||| | ||| | || || ||||| || || | Sbjct 350998 AC-CATTCGACTCTCAAGAAGCTAGAGAATTAAATATTCAAATTTTCGAGACTATCTACC 351056 Query 112723 ACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 112782 ||| || | || || | ||||| || | || ||||| || ||| | | | Sbjct 351057 ACGGTGCCGTCGAAGCCTCTATTGAGTTAGCTTCTGAAGAAGGTCCTTACGAATCTTACG 351116 Query 112783 AGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC 112842 ||||||||||||| || ||||| || | |||||||| ||||||| | || | | | | Sbjct 351117 AGGGTTCTCCAGCATCTCAAGGCTTGTTGCAATTTGACTTGTGGGA--GAGAAAGCCAAC 351174 Query 112843 T--TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 112900 | | || ||||| || | ||| || | || | ||| | | ||| Sbjct 351175 TGAGTTGTGGGATTGGGATGCCTTGAAGCAAAAGTTGGCCAAGCACGGTTTGAGAAACTC 351234 Query 112901 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 112960 | || | || ||||||||||| || || ||| | |||||||||||||| || ||||| Sbjct 351235 CTTATTAGTTGCTCCAATGCCAACTGCTTCTACCTCCCAAATCTTGGGTAACAACGAATG 351294 Query 112961 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 113020 || || || ||||| | |||||||| |||||| | || || || || || Sbjct 351295 TTTCGAGCCATACACCTCTAACATCTACTCAAGAAGAGTGTTGGCTGGTGAATTCCAAAT 351354 Query 113021 TGTCAACAAGCAT-CTCG-TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT--- 113075 ||||||| ||| || | || |||| | || | ||| ||||| || ||| Sbjct 351355 TGTCAAC--CCATACTTGTTGCGTGACTTGGTTGACTTGGGTATCTGG---AACGATTCC 351409 Query 113076 ATGAAG---GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTG-TGGATATTCC 113131 |||||| || |||| || |||||| | || | |||| | ||||| Sbjct 351410 ATGAAGAACAATATCATTTCTAA---CAATGGTTCTA-TCCAGTCATTGCCTAACATTCC 351465 Query 113132 AGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGA 113191 ||| || | ||| || ||| || |||||||| ||| ||| || ||||||| Sbjct 351466 AGACGAGCTCAAGGCCTTATACAAGACCGTTTGGGAGATCTCACAAAAGCATATCATTGA 351525 Query 113192 CATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGA--ATCTA-TTC 113246 |||||| || || | | ||||||||||||| ||| ||| ||| ||| | || Sbjct 351526 CATGGCTGCTGACAGAGCCGCCTTCATTGATCAA--TCACAGTCATTGAACATCCACATC 351583 Query 113247 ATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGT 113306 | ||| ||||| ||| ||||| | |||||||| | ||| |||||||||||||| Sbjct 351584 AAGGA---CCCAACAATGGGTAAGCTTACCTCTATGCATTTCTACGGTTGGAAGAAGGGT 351640 Query 113307 CTCAAAACGGGGATGTATTAC 113327 | || || || ||||| ||| Sbjct 351641 TTGAAGACTGGTATGTACTAC 351661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742299129360