Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 183 4e-41 >seq4 Length=2182181 Score = 183 bits (202), Expect = 4e-41 Identities = 1164/1844 (63%), Gaps = 69/1844 (4%) Strand=Plus/Minus Query 109414 TAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTG 109473 || |||||||| || || | ||| |||||| |||| | |||||| || | || || Sbjct 351660 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTA 351601 Query 109474 GAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCA 109533 | ||| || || || | ||||| ||||| || ||||| ||||| | Sbjct 351600 CCCATTGTTGGGTCCTTGATGTGGATGTTCAATGACTGTGATTGATCAATGAAGGCGGCT 351541 Query 109534 CGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAA 109593 | ||||| |||||||| |||||| |||||| || ||||| || |||||||| || Sbjct 351540 CTGTCAGCAGCCATGTCAATGATATGCTTTTGTGAGATCTCCCAAACGGTCTTGTATAAG 351481 Query 109594 TTCTTGATATCATCGGGAATGTCCA-CGATGTTTTGAATAGAGCCACCAGCCTTCACCAT 109652 ||||| || || ||||||| | ||| | || |||| |||| || || Sbjct 351480 GCCTTGAGCTCGTCTGGAATGTTAGGCAATGACTGGA-TAGA---ACCATTGTTAGAAAT 351425 Query 109653 GAGATCCTTCATC------TCTTTCGACCAGAGACCGACCTTTTTGAGATCGT-CAACAA 109705 || || ||| || || ||| |||| ||| | | | || |||||| Sbjct 351424 GATATTGTTCTTCATGGAATCGTTC---CAGATACCCAAGTCAACCAAGTCACGCAACAA 351368 Query 109706 G-ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTC 109764 | ||| |||||| | ||||||||||| | | || ||||||||||| Sbjct 351367 GTATGG--GTTGACAATTTGGAATTCACCAGCCAACACTCTTCTTGAGTAGATGTTAGAG 351310 Query 109765 GTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATG 109824 ||||| || |||||||| || ||||| || | |||||| | || ||||| || ||||| Sbjct 351309 GTGTATGGCTCGAAACATTCGTTGTTACCCAAGATTTGGGAGGTAGAAGCAGTTGGCATT 351250 Query 109825 GGAGCCA-TGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATT---GC 109880 ||||| | | | ||| ||||| | ||| | | || || || || | || Sbjct 351249 GGAGCAACTAATAAGGA-GTTTCTCAAACCGTGC---TTGGCCAACTTTTGCTTCAAGGC 351194 Query 109881 GTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTAC 109940 |||||||| | || ||| | || | || | ||||||| || ||| | | Sbjct 351193 ATCCCAATC----CCACAACTCAGTTGGCTTTCTC--TCCCACAAGTCAAATTGCAACAA 351140 Query 109941 ACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTC 110000 || | || || |||||||||| | || ||||| | || || | || ||||| Sbjct 351139 GCCTTGAGATGCTGGAGAACCCTCGTAAGATTCGTAAGGACCTTCTTCAGAAGCTAACTC 351080 Query 110001 GGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCG 110060 || || || | || | || || |||||||| ||||| ||| ||| | | Sbjct 351079 AATAGAGGCTTCGACGGCACCGTGGTAGATAGTCTCGAAAATTTGAATATTTAATTCTCT 351020 Query 110061 AGACTCTTCACAGTCGAAGGGAAGACCACAAAGA-ATAAACACATCCGCTAGACCCTGAA 110119 || |||| | ||||||| || | | | ||| | || || ||| || | ||| |||| Sbjct 351019 AGCTTCTTGAGAGTCGAATGGTA-ATCTCAATGCCATGAAAGTATCAGCCAAACCTTGAA 350961 Query 110120 CACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT---ACGGGGT 110176 |||| | |||| || | || | ||||||| | || | | |||| || |||| Sbjct 350960 CACCCAAGGCAATTGGTCTATTTCTTTTGTTAGATC-TCTCG--GCTTCTGGAACTGGGT 350904 Query 110177 AAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGA 110236 | |||| | |||||||| | || | || || |||| ||| |||| ||| || | Sbjct 350903 AGTAGTTTCTGTCGATGATCTTGTTCAAGTTACGGGTGACAGACTTAGTGACTTCGTGCA 350844 Query 110237 GTTTGTCGTAATCGAACG--------TTTTCGTC-TCCTTATTGACATATTTGGGGAGAG 110287 || ||| | | | || || || || | || | || | || || | || Sbjct 350843 ACTTCTCGAAGTTGTACCACAAAGACTTGTCATCCTTCTCAGCGAAAGAT---GGCAAAG 350787 Query 110288 CAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCG 110347 | || || || | || || |||| | || ||| || ||| || | || || Sbjct 350786 CGATCGAGGCCAAGTTACAGACAGCAACTTCTTCTGGAGAGGAGTACTCAACGATCTCAC 350727 Query 110348 TACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATG 110407 ||||||||| ||| ||| || | |||||||||||| || || | || ||| || | Sbjct 350726 AACACAAGTTAGAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGG 350667 Query 110408 CATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCC 110467 ||||||| || | |||| | || ||||| ||||| ||||| | | | || || | || Sbjct 350666 CATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCTTCCAAGATAGCGTACC 350607 Query 110468 ATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACA 110527 | | | || |||||| || | ||||| |||||| ||| | Sbjct 350606 ACAACTTTTGAGCCTTGACAGTGTTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTATA 350547 Query 110528 AGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGA 110587 | ||||| ||||| | ||||| || || | | || || | || ||| |||| | Sbjct 350546 ACTCCTCGAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAA 350487 Query 110588 GGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG 110647 | | ||||| || | || || ||||||||||||| || |||||||||| || | Sbjct 350486 GAGTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTG 350427 Query 110648 AGAAAAGGTCAC-GGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAG 110706 ||| | ||| | ||| || ||||| | ||| || || | | || | ||| Sbjct 350426 GGAACAAGTCTCTGGCTCTGATT-TCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAG 350368 Query 110707 TCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA-------TGGATCCCTTACG 110759 || | ||| || | ||||||||| || | || | || | |||| | ||| Sbjct 350367 TCGAAGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAGCACCTGGA-CGCTTGTT 350309 Query 110760 ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAAT 110819 || ||| |||| ||| || | || ||| |||||||| | | ||| |||||||| Sbjct 350308 ACCACCT---TGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTGGAATAAT 350252 Query 110820 TCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTGGA 110878 || | || |||||| ||||| ||| | | || | ||| ||| |||| ||| | Sbjct 350251 ACCGTTCGAGGTACCATTAGTACCAGCAATGTAAGCACC-AGTGGAACGGATGTTGTGAA 350193 Query 110879 TATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCA 110937 | |||| |||||||||||| || | ||| ||| ||||| ||| || ||| | Sbjct 350192 TGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAG-GTATCG 350134 Query 110938 TAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGA 110997 |||||||||||||| || || |||| |||| | || || ||||||||||| || ||| Sbjct 350133 TAAATACCATCAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGA 350074 Query 110998 CGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATC 111057 || || || || ||||| | || || | | || |||| | || ||| |||||| Sbjct 350073 GATGGGGTACCAGCGTTGAACAAAGTTGGAGAACCGTGGGTGAAGAAACGTTGAGACATC 350014 Query 111058 TTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGC 111117 ||| || | || | | | || | ||||||||||||||| | ||||| | Sbjct 350013 AAGTTATAAGATTCAATGACCTTCTCAATGTCGTCACCGTGAATACCAATAGAAACTCTC 349954 Query 111118 ATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTC 111177 |||| || || ||| || |||| | ||| || | ||||| |||||| || Sbjct 349953 ATGATCAAATGTTGTGGTCTTTCAGCGACCTTGCCGTTGACACGTAAAAGGTAGGATCTC 349894 Query 111178 TCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 |||| ||||||| ||| ||||| | | ||||||||| || Sbjct 349893 TCTAAAGTCTTGAAACCGAAGTAGTTGTAGTTGAAATCACGGTC 349850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975904291400