Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 223 4e-53 seq6 100 3e-16 >seq4 Length=2182181 Score = 223 bits (246), Expect = 4e-53 Identities = 943/1471 (64%), Gaps = 49/1471 (3%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||| | ||||| || || || ||||| || |||||||||||||| | ||| || Sbjct 351321 TAGATGTTAGAGGTGTATGGCTCGAAACATTCGTTGTTACCCAAGATTTGGGAGGTAGAA 351262 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTG---ATGCGT 106051 || ||||||||||| || | || | ||| | | ||| | |||| | | Sbjct 351261 GCAGTTGGCATTGGAGCAACTAATAAGGAGTTTCTCAAACCGTG---CTTGGCCAACTTT 351205 Query 106052 TCCTTGAGAACATCCCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATATCAAATT 106109 | ||| | ||||||| || | | || | | |||| | ||||||| ||||||| Sbjct 351204 TGCTTCAAGGCATCCCAATCCCACAACTCAGTTGGCTTTCTC--TCCCACAAGTCAAATT 351147 Query 106110 GAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAG 106169 | | || ||||| || | ||||||||||| | | || || | ||||| |||||| Sbjct 351146 GCAACAAGCCTTGAGATGCTGGAGAACCCTCGTAAGATTCGTAAGGACCTT---CTTCAG 351090 Query 106170 ---CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 106226 | || ||| || || | || |||| || || || || || || || || Sbjct 351089 AAGCTAACTCAATAGAGGCTTCGACGGCACCGTGGTAGATAGTCTCGAAAATTTGAATAT 351030 Query 106227 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA---ATAAATACATCCG 106283 | | || | ||||| | || || |||| ||| | ||| || || ||| | Sbjct 351029 TTAATTCTCTAGCTTCTTGAGAGTCGAATG-GTAAT--CTCAATGCCATGAAAGTATCAG 350973 Query 106284 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 106343 | | ||||||||||||||| |||| ||||| | || | ||||| | || || ||| Sbjct 350972 CCAAACCTTGAACACCCAAGGCAATTGGTCTATTTCTTTTGTTAGA-TCTCTCGGCTTCT 350914 Query 106344 C-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 106402 ||| || || | |||||||| |||| ||| | || ||| ||| ||| ||| Sbjct 350913 GGAACTGGGTAGTAGTTTCTGTCGATGATCTTGTTCAAGTTACGGGTGACAGACTTAGTG 350854 Query 106403 ATTTCATGAAGTTTTTCATAAT-----CA-AAAG---TGCGAGTCTCTTCATTGACATAC 106453 | ||| || | || || | | || |||| || | || ||| || | | Sbjct 350853 ACTTCGTGCAACTTCTCGAAGTTGTACCACAAAGACTTGTCATCCTTCTCAGCGAAAGA- 350795 Query 106454 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 106513 ||| | ||||| || ||||| || || ||||| || || | | |||||| Sbjct 350794 --TGGCAAAGCGATCGAGGCCAAGTTACAGACAGCAACTTCTTCTGGAGAGGAGTACTCA 350737 Query 106514 AAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTT 106573 | || || ||||||||| ||| ||| || | ||||| ||||||||||| |||| Sbjct 350736 ACGATCTCACAACACAAGTTAGAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTC 350677 Query 106574 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGA 106633 ||||| || ||||||||||| | |||| | || || || || || ||||| | | | Sbjct 350676 TTGTTACAGGCATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCTTCCAAG 350617 Query 106634 ATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTA 106692 || || | ||||| | | | | || | ||| || | | | ||| || |||||| Sbjct 350616 ATAGCGTACCACAACTTTTGAGCCTTG-ACAGTGTTTCTACCTCTTCCTTCTCTCTCGTA 350558 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 | ||| | | || || || ||||| | || | | ||||| || | || Sbjct 350557 ACGTTCGTATAACTCCTCGAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTT 350498 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 |||| ||||||||| ||| | ||| | || || | ||||||||| | |||||||| Sbjct 350497 TGGAGAGAAAAGAGTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAATCTGGAAT 350438 Query 106813 CCACAGGGATGAAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 106871 ||||| | || || | ||||| | | || ||||| | ||| || || || | Sbjct 350437 CCACAAAGCTGGGAACAAGTCTCTGGCTCTGA-TTTCTTCCTTACCGTGATTCTTTCTGA 350379 Query 106872 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCT 106931 |||| ||| || | ||| || |||||||||||||| | || | || | || || Sbjct 350378 TGTCAATGAAGTCGAAGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAGCACC-- 350321 Query 106932 TTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985 | ||||| ||| |||| | || || | || ||| ||| || || |||| || Sbjct 350320 -TGGACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCA 350262 Query 106986 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 107045 ||||||||||||| | || |||||| || || ||| || | ||| | | Sbjct 350261 TTGGAATAATACCGTTCGAGGTACCATTAGTACCAGCAATGTAAGCACCAGTGGAACGGA 350202 Query 107046 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105 | || ||||||| |||||||| ||||| | ||| || || ||||| | | | Sbjct 350201 TGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCA 350142 Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165 || | || ||||| | || ||||| ||||| |||||| |||||| ||| |||| Sbjct 350141 AGGTATCGTAAATACCATCAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACA 350082 Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 107225 | || || ||| |||||||| ||||| | ||||| | |||| |||| | || || Sbjct 350081 TTTGTGGAGATGGGGTACCAGCGTTGAACAAAGTTGGAGAACCGTGGGTGAAGAAACGTT 350022 Query 107226 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGG 107285 | |||||| || || | || | ||| |||||||| || ||||| || || || | Sbjct 350021 GAGACATCAAGTTATAAGATTCAATGACCTTCTCAATGTCGTCACCGTGAATACCAATAG 349962 Query 107286 CCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGAT 107345 || | ||| | || | ||| ||| |||| || |||| | || ||| ||| | Sbjct 349961 AAACTCTCATGATCAAATGTTGTGGTCTTTCAGCGACCTTGCCGTTGACACGTAAAAGGT 349902 Query 107346 AGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 || |||| | || |||| ||| ||||| Sbjct 349901 AGGATCTCTCTAAAGTCTTGAAACCGAAGTA 349871 >seq6 Length=1594198 Score = 100 bits (110), Expect = 3e-16 Identities = 196/285 (69%), Gaps = 11/285 (4%) Strand=Plus/Plus Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGC- 9337 || ||||||||||| || ||| | |||||| | ||| ||| || |||||||| || Sbjct 87989 TCGAAACCATCCATTTCGACCAATAATTGGTTCAAAGTAGTTTCACGCTCATCATTAGCA 88048 Query 9338 ----TGGCAT-ACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAG 9392 |||||| ||| | || |||| || || | ||||||||||||||||| || Sbjct 88049 CCACTGGCATTACCCTTCGAAC---GTTGTTTACCAATGGCATCAATCTCATCAACAAAA 88105 Query 9393 ACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCC 9452 |||||| | || |||||| |||||| | | ||| | || || || || || || Sbjct 88106 ACAATAGAAGGAGCATTTTCACGGGCGGTCTTAAACAAGTCACGCACTCTGGATGCACCA 88165 Query 9453 ACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGATGAAGGGGACATTAGA 9511 |||||||||||||| || ||||| | || | || ||| | | ||||| ||| | Sbjct 88166 ACACCAACAAACATTTCGACAAACTCTGATCCAGACACAGAGTA-AAAGGGTACACCCGC 88224 Query 9512 TTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTgg 9556 || || || | |||| || | | ||||||||| |||||||| Sbjct 88225 CTCTCCGGCGGTTGCTCTTGCAATTAAAGTCTTACCAGTACCTGG 88269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980704128120