Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq2 91.5 1e-13
>seq2
Length=2390349
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || ||||| |||||||||||||||| ||| ||| || || ||||| ||||| |||
Sbjct 2169393 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 2169452
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| ||| |||| |||| || || || || || || | || ||| ||||| | ||
Sbjct 2169453 AGAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGA 2169512
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || |||||||| ||||| || ||| | || | ||| || ||||||
Sbjct 2169513 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCAGAGGACTCAACT 2169572
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| | || || || || || || | |||||| || || || ||||||
Sbjct 2169573 TCAAGAGTGATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 2169620
Score = 89.7 bits (98), Expect = 3e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 34764 AACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGT 34823
|| || ||||||||||||| ||| |||||| |||||||| ||||| || || |||
Sbjct 2169927 AATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTA 2169986
Query 34824 TCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34883
| || |||| || || || || || |||| || || ||||| | || | || |||
Sbjct 2169987 CCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCAGGTGGAATACCTTCC 2170046
Query 34884 TTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTT 34943
||||| ||||| || ||| | || | ||| | |||||| |||| |||
Sbjct 2170047 TTGTCTTGGATCTTAGACTTAACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTG 2170106
Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| || || || | |||||| || || || ||||||
Sbjct 2170107 ATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 2170145
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || ||||| || ||||||||||||| ||| |||||| |||||||| ||||| |||
Sbjct 2170374 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAA 2170433
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| ||| | || |||| || || || || || || | || ||| ||||| | ||
Sbjct 2170434 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGA 2170493
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || |||||||| ||||| |||||| | || | ||| || ||| ||
Sbjct 2170494 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCGACT 2170553
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | || || || || || || | ||||| || ||||| |||||
Sbjct 2170554 TCAAGAGTGATAGTCTTACCTGTTAATGTCTTAACGAAGATTTGCAT 2170600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633548565864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |