Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 >seq2 Length=2390349 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| |||||||||||||||| ||| ||| || || ||||| ||||| ||| Sbjct 2169393 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 2169452 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| |||| |||| || || || || || || | || ||| ||||| | || Sbjct 2169453 AGAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGA 2169512 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| ||||| || ||| | || | ||| || |||||| Sbjct 2169513 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCAGAGGACTCAACT 2169572 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || || || || || || | |||||| || || || |||||| Sbjct 2169573 TCAAGAGTGATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 2169620 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34764 AACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGT 34823 || || ||||||||||||| ||| |||||| |||||||| ||||| || || ||| Sbjct 2169927 AATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTA 2169986 Query 34824 TCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34883 | || |||| || || || || || |||| || || ||||| | || | || ||| Sbjct 2169987 CCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCAGGTGGAATACCTTCC 2170046 Query 34884 TTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTT 34943 ||||| ||||| || ||| | || | ||| | |||||| |||| ||| Sbjct 2170047 TTGTCTTGGATCTTAGACTTAACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTG 2170106 Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || || || | |||||| || || || |||||| Sbjct 2170107 ATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 2170145 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| || ||||||||||||| ||| |||||| |||||||| ||||| ||| Sbjct 2170374 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAA 2170433 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| | || |||| || || || || || || | || ||| ||||| | || Sbjct 2170434 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGA 2170493 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| ||||| |||||| | || | ||| || ||| || Sbjct 2170494 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCGACT 2170553 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || || || || || || | ||||| || ||||| ||||| Sbjct 2170554 TCAAGAGTGATAGTCTTACCTGTTAATGTCTTAACGAAGATTTGCAT 2170600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633548565864