Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq8 201 9e-46 seq5 172 4e-37 seq10 107 2e-17 seq2 100 2e-15 >seq8 Length=1108550 Score = 201 bits (222), Expect = 9e-46 Identities = 473/706 (67%), Gaps = 20/706 (3%) Strand=Plus/Plus Query 551894 AGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTA- 551952 ||||||| | | | ||||| ||||| ||||||||||| ||| || || || || Sbjct 489301 AGCTCTTAGAAGATTGAGAACCGCTTGTGAAAGAGCCAA--GAGATCCTTGTCCTCGTCA 489358 Query 551953 -CTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATT 552011 | ||||| | ||||| | || || | | ||||| ||||| | | || | ||| Sbjct 489359 GCACAAACTTCGATTGAGATTGACTCTCTTTACGAGGGTATTGACTTCTACACCTCCATT 489418 Query 552012 TCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTA 552071 | || ||| ||||| || | ||| | || | || ||| || | || ||||| Sbjct 489419 ACAAGAGCCCGTTTTGAGGAGTTGTGTGCCGACTTATTCAGATCTACCTTAGACCCAGTT 489478 Query 552072 GAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTT 552131 || ||||| | | ||| | ||| ||||||| || |||| || || || || | ||| Sbjct 489479 GAGAAAGTTCTCAAGGATGCTAAGCTTGATAAGTCTCAAGTTCACGAGATCGTCTTGGTT 489538 Query 552132 GGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGT 552188 ||||| ||||||||||||||||| |||| ||| | | |||| ||||| || || Sbjct 489539 GGTGGTTCTACAAGAATTCCTAAGATTCA-GAA--GCTCGTTTCTGATTTCTTCAACGGA 489595 Query 552189 AAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAA 552248 || | ||| | | | || |||||||| || || ||||| ||||| ||| ||||| Sbjct 489596 AAGGAGCCAAACAAGTCTATCAACCCAGATGAAGCCGTCGCCTACGGTGCTGCAGTTCAA 489655 Query 552249 GCAGCTATTCTTTCTGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTGTAGATGT 552307 ||||||||| | | || | || | | ||| || ||| | | || | | ||||| Sbjct 489656 GCAGCTATTTTGACAGGTGACACCTCCTCAAAGAC-ACAGGACTTGTTATTATTGGATGT 489714 Query 552308 TACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAG 552367 | |||| | || | ||| | || || | || ||| ||||||| || | || || Sbjct 489715 TGCTCCATTGTCATTAGGTATTGAGACCGCAGGTGGTGTTATGACCAAATTGATTCCAAG 489774 Query 552368 AAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAAC 552427 ||| | || ||||| || || ||| | || ||||| | | | || || ||| | Sbjct 489775 GAATGCCACCATTCCAACCAAGAAGTCTGAGATTTTCTCTACTTTTGCTGACAACCAACC 489834 Query 552428 TGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACT 552487 | |||| || ||| |||||||||| |||||| | || || || || ||||| Sbjct 489835 AGGTGTTTTGATCCAAGTTTTTGAAGGTGAAAGAGCAAGAACAAAGGACAA----CAACT 489890 Query 552488 TG----GTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTG 552543 || ||| ||| | || |||||||| |||||||| | ||||| || ||||||| Sbjct 489891 TGTTGGGTAAGTTTGAGTTGAGTGGTATTCCACCTGCTCCAAGAGGAGTCCCACAAATTG 489950 Query 552544 AAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 ||||||| |||||||||||||| || || || |||||||| |||| Sbjct 489951 AAGTTACATTCGATATCGATGCAAACGGTATCTTGAATGTCTCTGC 489996 Score = 127 bits (140), Expect = 2e-23 Identities = 359/544 (66%), Gaps = 18/544 (3%) Strand=Plus/Plus Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| || || || ||||| || || ||||||||||| || || || |||||| ||||||| Sbjct 488596 AGTCGAGATCATCGCCAACGACCAGGGTAACAGAACAACCCCTTCGTATGTTGCTTTCAC 488655 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || ||||| | | || |||||||||| ||||| | || || | || ||| | || Sbjct 488656 CGACACTGAGCGTCTAATTGGTGATGCCGCAAAGAACCAGGCTGCCATGAACCCTTCAAA 488715 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || |||| || || || | | || ||||||| || ||||| | |||| || Sbjct 488716 CACCGTTTTCGACGCCAAGAGAATGATCGGAAGAAAGTTCAATGACACCGAGCTTCAAGC 488775 Query 550231 AGATATGAAGCATTGGCCTTTCCA---AATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 |||||| || |||| || ||| | || | || | ||||| ||| | ||||| Sbjct 488776 AGATATCAAACATTTCCCCTTCAAGGTCATCGACAAGG---GCGGAAAGCCTAACATTGA 488832 Query 550288 AGCT-ACTCATGAAGGATCTG-TTAAACAATTTTCACCAGAACAAATTTCATCTATGGTT 550345 | | | | | |||| | ||| || |||||||| |||| || || ||| | Sbjct 488833 GGTTGAGT--TCAAGGGCGAGACCAAAACCTTCACACCAGAAGAAATCTCGTCCATGATC 488890 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGG-TCAAGAAGTTACGGATGCAGT 550404 || | || ||||| |||| || || |||| || | || | || |||||||| Sbjct 488891 TTGGTCAAGATGAAGGAAACCGCTGAAAGTTACCTTGGATCCACAA-TCACTGATGCAGT 488949 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | ||||| || || || || || || ||||| | ||||| || ||||| ||||| | Sbjct 488950 TGTTACTGTCCCTGCTTACTTCAACGATTCACAGAGACAAGCCACCAAAGACGCTGGTCT 489009 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 |||||||| | ||||| | | ||||| || ||||| ||||| || || | || || Sbjct 489010 CATTGCTGGTTTGAATGTGTTGAGAATTATTAACGAACCAACTGCCGCCGCTATCGCTTA 489069 Query 550525 TGGACTTGATAA------ACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGG 550578 || | || || || | | ||| |||| |||||| | ||||| || | || Sbjct 489070 CGGTTTGGACAAGAAGGGCCAAAGCGCTCATGAACAGAATGTATTGATCTTCGACTTGGG 489129 Query 550579 AGGT 550582 |||| Sbjct 489130 AGGT 489133 Score = 93.3 bits (102), Expect = 3e-13 Identities = 353/548 (64%), Gaps = 17/548 (3%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| ||||| |||||||| || || || ||||||| | || | || | Sbjct 942426 GCTATCGGTATCGATTTAGGTACTACCTACTCATGTGTTGCTACTTTCGACTCTGCT--- 942482 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 |||||||| |||||||| || |||||||||||| ||| ||||| | || ||||||| Sbjct 942483 GTTGAAATCATTGCCAACGAACAAGGTAACAGAGTTACCCCATCCTTCGTCGCTTTCACT 942542 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 | ||| ||| |||||||||| || || | || ||| || || || | || Sbjct 942543 AACGAAGAAAGATTAATTGGTGATGCCGCCAAGAACCAGGCCGCTTTGAACCCAAAGAAC 942602 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 ||| |||| || ||||| ||||| || || | || | ||| | || || Sbjct 942603 ACTGTTTTCGACGCTAAGCGTTTGATCGGTCGTGCCTTCGAAGATGAATCCGTCCAAAAG 942662 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-C 550290 ||||| ||| |||||| ||| | | || | | ||||| ||| | || |||| | Sbjct 942663 GATATCAAGTCTTGGCCATTCAAGGTCATTGACGCCAACGGAAACCCTCAAATCGAAGTC 942722 Query 550291 TACT-CATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATGGTT 550345 | | | | |||| || ||| || || || || | || || || |||||| Sbjct 942723 GAATACCTCGAGGA------AACCAAGACTTTCTCCCCTCAAGAGATCTCCTCCATGGTT 942776 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGT 550404 || | || ||||| ||| || ||| | ||| ||||| || | | ||||| Sbjct 942777 TTGACCAAGATGAAGGAAATCGCTGAGGCTAAGATCGGT-AAGAAGGTCGAGAAGGCAGT 942835 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | || || ||||| || || || ||| | ||| | ||||| || || |||||||| Sbjct 942836 TGTTACCGTCCCAGCTTACTTCAACGACGCTCAAAGACAAGCCACCAAGGATGCTGGTGC 942895 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 ||||| || | || || | | || || || || || |||||||| || |||| || Sbjct 942896 CATTGCCGGTTTGAACGTCTTGAGAATCATTAACGAGCCAACTGCTGCCGCCATTGCCTA 942955 Query 550525 TGGACTTG 550532 || |||| Sbjct 942956 CGGTCTTG 942963 >seq5 Length=1741095 Score = 172 bits (190), Expect = 4e-37 Identities = 553/851 (65%), Gaps = 24/851 (3%) Strand=Plus/Minus Query 551751 TCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGC 551810 ||| ||||||| ||| |||| || || ||| ||| || |||| | ||||| Sbjct 712659 TCTATCGAAGACGGTATCTTCGAGGTCAAGGCCACTGCTGGTGACACTCACTTGGGTGGT 712600 Query 551811 GAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAA 551870 |||||||| || || ||||| || | | || | || || || |||| ||||| Sbjct 712599 GAAGATTTCGACAACAGACTTGTTACTCACTTCGTCAACGAATTCAAGAGAAAGAACAAG 712540 Query 551871 GTTGATCTATCTACATCTGCCAAAG--CTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAG 551928 || | || || | |||||| |||| | | | |||||||| || ||||||| Sbjct 712539 AAGGACTTGTCCAC--CAACCAAAGAGCTCTCAGAAGATTGAGAACTGCCTGTGAAAGAG 712482 Query 551929 CCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGG 551988 | || || | ||||| || | | || ||| | || ||| | || || | | |||| Sbjct 712481 CTAAGAGAACCCTTTCTTCCTCTGCCCAGACCTCCATCGAAATTGACTCCCTTTACGAGG 712422 Query 551989 GAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCT 552048 | |||| | | || |||| | || || | ||| ||||| | ||| || | | Sbjct 712421 GTGTTGACTTCTACACCTCTATCACCAGAGCTAGATTCGAAGAATTATGTCAAGACTTGT 712362 Query 552049 TTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCA 552108 | ||| || | || ||||| || | || || ||||| | ||| |||| || || Sbjct 712361 TCAGATCCACTTTGGACCCAGTCGAGAAGGTCTTGAGAGACGCCAAGGTTGACAAGTCTC 712302 Query 552109 AAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGT 552168 |||| || || ||||| | || ||||| ||||| |||||||| || ||| ||| | Sbjct 712301 AAGTCCACGAGATTGTCTTGGTCGGTGGTTCTACCAGAATTCCAAAGGTTC---AAAAGC 712245 Query 552169 TAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTG 552225 | ||| | ||| || ||||| | ||| | | | || ||||||||||||| Sbjct 712244 TCGTTTCCGACTTCTTCAACGGTAAGGAGCCAAACAGATCTATCAACCCAGATGAGGCTG 712185 Query 552226 TTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTAC 552285 ||||||| ||||| || | ||||| ||||| | || || | ||| | || | Sbjct 712184 TTGCCTACGGTGCTGCTGTCCAAGCCGCTATCTTGTCCGGTGACACTTCTTCTAAGACCC 712125 Query 552286 AAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTA 552345 || | | | ||| | |||||| |||| | ||||||||| | || || | ||| |||| Sbjct 712124 AAGACTTGTTGCTTTTGGATGTTGCTCCATTGTCTCTTGGTATTGAGACTGCTGGTGGTA 712065 Query 552346 TTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTT- 552404 | ||||| || | ||| ||||| ||||||| || || || || || | ||| Sbjct 712064 TCATGACCAAGTTGATCCCAAGAAACTCTACTATCCCAACCAAGAAGTC-CGAGACTTTC 712006 Query 552405 TCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAA 552464 ||||| || | || || ||| | | ||| |||||| | || ||||| |||||| Sbjct 712005 TCTACTTACGCTGACAACCAACCAGGTGTCTTGATTCAAGTCTTCGAAGGTGAAAGAGCT 711946 Query 552465 TTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAA------GGTATTCCTCCT 552518 || || || || ||||||| || | || || ||| ||||| || || Sbjct 711945 AAGACAAAGGACAA----CAACTTGTTAGGT--AAGTTCGAACTTTCTGGTATCCCACCA 711892 Query 552519 GCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTG 552578 || || | || || || ||||| ||||| || ||||| || ||||||||||| |||||| Sbjct 711891 GCCCCAAGAGGTGTTCCACAAATCGAAGTCACCTTCGACATTGATGCCAATGGTATTTTG 711832 Query 552579 AATGTGACTGC 552589 || || |||| Sbjct 711831 AACGTCTCTGC 711821 >seq10 Length=291736 Score = 107 bits (118), Expect = 2e-17 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 390807 ATTAATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTTCTTACGGT 390866 || |||||||| |||||||| || |||| || | | || | |||||| ||| Sbjct 31720 ATCAATACCATCTTCACCATAGACGAATTGGATGATATCTCCAAGAGAGTTTCTTGTGGT 31779 Query 390867 ACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACC 390926 |||||| || | || | || ||||| || |||||| || | ||| |||||||| Sbjct 31780 ACCATCGTAGTGGACCATGATATCTTCCAAAGCTTTAACCAAACGACGTTGAATATAACC 31839 Query 390927 AGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAA 390986 ||| |||||||| || | ||||||| |||| ||||||||| || |||||| | ||||| Sbjct 31840 AGTCTCTGCAGTCTTCACAGCAGTATCGATAAGACCTTCTCTACCAGCCATAGCGTGGAA 31899 Query 390987 GAAAAATTC 390995 |||||| || Sbjct 31900 GAAAAACTC 31908 >seq2 Length=2390349 Score = 100 bits (110), Expect = 2e-15 Identities = 139/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || ||||| |||| |||||||| |||||| | ||| || || || || || Sbjct 2169433 TTTGG--ATGTTGTAGTCAGAAAGAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGAT 2169490 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | |||||| || ||||| ||||| ||||| || ||||| || || || || || Sbjct 2169491 CAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTC 2169550 Query 563406 AATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 || || |||| | || | | ||| ||||| | ||| |||||||| | ||| || |||| Sbjct 2169551 GATAGTGTCAGAG-GACTCAACTTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTGACGA 2169609 Query 563465 AAATTTGCATA 563475 ||||||||||| Sbjct 2169610 AAATTTGCATA 2169620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295312501370