Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq4 158 1e-33 >seq4 Length=2182181 Score = 158 bits (174), Expect = 1e-33 Identities = 301/442 (68%), Gaps = 1/442 (0%) Strand=Plus/Minus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 || || ||||| || || ||| || |||||||||||||| | ||||| || ||||| Sbjct 397957 AATAACAAACAGGCGAAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTAGAG 397898 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 || || || |||||||| |||||||| || || | ||| || || | || ||||| ||| Sbjct 397897 AAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAACCA 397838 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 ||||||||||||||||| || ||||| || || | | | |||||| | | Sbjct 397837 CTGAAGAAAATACCTTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCA 397778 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406 | |||||| |||||| | | |||||| ||||| | | | ||| ||| | ||| Sbjct 397777 TCATCAGAGATCCATCTCAAAGCCCAATCAGCCTTCTTTCTGATGCATGGAATGTTGTCA 397718 Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466 || || || || || |||| ||| | | || | | ||||| ||||||| ||| Sbjct 397717 ATGGCGTTGAAAAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAACAAA 397658 Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526 || | || |||||||| ||||| || || || ||||| || |||||| | ||| Sbjct 397657 GAGTAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCT 397598 Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586 || | | ||| || ||| | | || ||| | ||||| || || || || || ||| Sbjct 397597 TCTGGGATTTGGACTTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACGATACCGTCA 397538 Query 37587 CTAGCTGCAAAGAAAG-CAAGA 37607 || || ||||||| ||||| Sbjct 397537 GAGGCGGCGAAGAAAGCCAAGA 397516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316703748520