Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=3044122 Score = 95.1 bits (104), Expect = 1e-14 Identities = 209/308 (68%), Gaps = 4/308 (1%) Strand=Plus/Minus Query 29986 CTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30045 |||||||| ||||| || | | || || || || | ||||| || |||||| Sbjct 1793747 CTCACGTAGAACTGGCAGAAGACATGACATGGTGGTAAGGCCATCTTTCCAAAGTCTGGT 1793688 Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105 || ||||| ||| ||| ||| || | ||||| | |||||| || | | | | | Sbjct 1793687 GGATTCCAAGCGGACATGATAATTCTTCTGTCGTATGGGTTTGTCTTTAACTTCTTGATG 1793628 Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTC 30164 | | ||||| ||| || | || || | |||||||| ||| ||| |||| || Sbjct 1793627 ACATCTTGCAACTGGTCAAATCCTTGACCGGTGTAGTCTGTG-TCACAATCCTTGTATTC 1793569 Query 30165 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT-TCCCTGT 30223 ||||||||||| ||||||||||| ||||| || ||||||| || || ||| | | | Sbjct 1793568 AGCTCCGAAATGTCTCCACTGGAATCCGTAAACTGGTCCCAAATCACCTTCTCTACGTTC 1793509 Query 30224 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30283 | || || ||| ||||||||| || || | || || || | |||||||| || || | Sbjct 1793508 GGTC-AAACCCAACTTGTCCAAGAACTCACGAGATCCATTTCCTTCCCAGATTTTCACGC 1793450 Query 30284 CCTTCTCG 30291 | || ||| Sbjct 1793449 CTTTTTCG 1793442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617535259649