Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-17 seq4 89.7 4e-13 >seq2 Length=2390349 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 || ||||| || || ||| ||||||||||| ||||| ||||| ||| ||| | |||| Sbjct 2169933 AAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACCGTCT 2169992 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674 ||||| |||||||| || || || | |||||||| || | |||| || |||||||| Sbjct 2169993 TCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCAGGTGGAATACCTTCCTTGTCT 2170052 Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734 ||||| || || | | || || || | ||| ||||| | || || || Sbjct 2170053 TGGATCTTAGACTTAACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTC 2170112 Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||||||| || || ||||| ||||| Sbjct 2170113 TTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170144 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 || ||||| || || ||| ||||||||||| ||||| ||||| ||| ||| | |||| Sbjct 2170389 AAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTACCGTCT 2170448 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| |||||||| || || |||| || ||||| || | |||| || |||||||| Sbjct 2170449 TCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 2170507 >seq4 Length=2182181 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 || ||||| || | ||| ||| || || || ||||| ||||| || ||| | |||| Sbjct 2128795 AAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCT 2128854 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674 |||||||||||||| || || |||| || ||||| || | |||| || |||||||| Sbjct 2128855 TCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCC 2128914 Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734 ||||| || ||| | | | || || | ||| || |||| ||||| || Sbjct 2128915 TGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTC 2128974 Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| || || ||||| ||||| Sbjct 2128975 TTACCTGTTAAAGTCTTGACGAAAATTTGCAT 2129006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937539645199