Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq2 129 1e-24 >seq2 Length=2390349 Score = 129 bits (142), Expect = 1e-24 Identities = 172/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | ||| || || || | ||| | ||||| || || || ||| Sbjct 2170371 ATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCA 2170430 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | || |||||||| |||||||| || || ||||| ||||| |||||| Sbjct 2170431 GAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGT 2170490 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || || || || | || || || || Sbjct 2170491 GGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCG 2170550 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATTAGA 192545 ||||| ||||| || || ||||| |||||||| |||| || || |||||| ||||||| Sbjct 2170551 ACTTCAAGAGTGATAGTCTTACCTGTTAATGTCTTAACGAAGATTTGCATTGTATTAGA 2170609 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | ||| || || || | ||| | || || ||| || || ||| Sbjct 2170143 ATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCA 2170202 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | || |||||||| |||||||| || || ||||| ||||| |||||| Sbjct 2170203 GAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGT 2170262 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || || || |||| || || || || Sbjct 2170263 GGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCG 2170322 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | |||||||| |||||||| || || || | || || ||||| Sbjct 2170323 ACTTCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479836022550