Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq2 152 9e-32 seq4 122 2e-22 >seq2 Length=2390349 Score = 152 bits (168), Expect = 9e-32 Identities = 176/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || ||| || || || | ||| | ||||| ||| || || || Sbjct 2170371 ATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCA 2170430 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || |||| |||||||| |||||||| ||||| ||||| |||||||||||| Sbjct 2170431 GAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGT 2170490 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || || || || || || || || || Sbjct 2170491 GGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCG 2170550 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTA 172076 ||||| ||||| || || ||||| |||||||| |||| ||| || |||||| ||||| Sbjct 2170551 ACTTCAAGAGTGATAGTCTTACCTGTTAATGTCTTAACGAAGATTTGCATTGTATTA 2170607 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || ||| || || || | ||| | || || || || || || Sbjct 2170143 ATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCA 2170202 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || |||| |||||||| |||||||| ||||| ||||| |||||||||||| Sbjct 2170203 GAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGT 2170262 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || || || ||||| || || || || Sbjct 2170263 GGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCG 2170322 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | |||||||| |||||||| || || || | ||| || ||||| Sbjct 2170323 ACTTCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170372 Score = 120 bits (132), Expect = 5e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 171854 TCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTC 171913 || ||| || || || | ||| | ||||| ||| || || || || | || || | Sbjct 2169929 TCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACC 2169988 Query 171914 GTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTT 171973 ||| |||||||| |||||||| || ||||| | ||||||||||||||| || ||||| || Sbjct 2169989 GTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCAGGTGGAATACCTTCCTT 2170048 Query 171974 ATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAAT 172033 ||||| || ||| || || || ||||| || || || || || || || || || Sbjct 2170049 GTCTTGGATCTTAGACTTAACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGAT 2170108 Query 172034 GGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| |||||||| || || || | ||| || ||||| Sbjct 2170109 GGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170144 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || || || || || | ||| | || || || || || || || Sbjct 2169392 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 2169451 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | || || | || |||||||| |||||||| || || ||||| |||||||||||||| Sbjct 2169452 AAGAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGG 2169511 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || ||||| || ||||| || || || || || ||||| || || || || || Sbjct 2169512 AATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCAGAGGACTCAAC 2169571 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| ||||| || || |||||||| || || || | ||| || ||||| Sbjct 2169572 TTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2169619 >seq4 Length=2182181 Score = 122 bits (134), Expect = 2e-22 Identities = 175/247 (71%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 171826 TTTTTAGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAG 171885 ||||| ||| || ||||||||| | || ||| || || || || || | ||| || Sbjct 2128763 TTTTTCTCTTCTTACCACCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGACTCCTTCT 2128822 Query 171886 AAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATC 171945 || || || || || | | || |||| ||||| || |||||||| || || |||| Sbjct 2128823 GGATGTTGTAGTCAGAAAGGGTTCTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATC 2128882 Query 171946 TCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAG 172005 | |||||||||||||| || ||||| || || || || || || ||||| || | Sbjct 2128883 TTTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGG 2128942 Query 172006 TATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065 | || || || || ||||| | |||||||| ||||| ||||| || || | ||| || | Sbjct 2128943 TGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCTGTTAAAGTCTTGACGAAAATTT 2129002 Query 172066 GCATTTT 172072 ||||||| Sbjct 2129003 GCATTTT 2129009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135852915400