Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 6e-24
>seq2
Length=2390349
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || | || ||||| ||||| || || ||||| || || |
Sbjct 2169619 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATCACTCTTGAAGTTGAGTCCTCT 2169560
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | || |||||||||||| ||||| || || || || ||
Sbjct 2169559 GACACTATCGACAACGTTAAGTCCAA-GATCCAAGACAAGGAAGGTATTCCACCTGACCA 2169501
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | |||||||| || || || || |||| ||| |||| | || || || ||
Sbjct 2169500 ACAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTCTTTCTGACTACAA 2169441
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| ||||||||||| || || |||||||| ||| ||||| | || ||
Sbjct 2169440 CATCCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 2169393
Score = 125 bits (138), Expect = 6e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 24699 ATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAG 24758
|||| ||||| ||||| |||| || |||| ||||| ||||| || || ||||| ||
Sbjct 2170605 ATACAATGCAAATCTTCGTTAAGACATTAACAGGTAAGACTATCACTCTTGAAGTCGAGT 2170546
Query 24759 CCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCG 24818
|| | ||||| | || | || || |||||||||||||| ||||| || || || |
Sbjct 2170545 CCTCTGACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTG 2170486
Query 24819 ATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATT 24878
| |||||| | ||||| || || || || || |||| || |||| | || || |
Sbjct 2170485 ACCAACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACT 2170426
Query 24879 ATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
| ||||||||||| ||||| || || |||||||| || ||||| | || ||
Sbjct 2170425 ACAACATTCAAAAAGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 2170374
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || | || ||||| || ||||| | ||||| || | ||
Sbjct 2170372 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCTTCC 2170313
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | || |||||||||||| ||||| || || || || ||
Sbjct 2170312 GACACTATCGACAACGTTAAGTCCAA-GATCCAAGACAAGGAAGGTATTCCACCTGACCA 2170254
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||| || || || || || |||| || |||| | || || || ||
Sbjct 2170253 ACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAA 2170194
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| ||||||||||| || || |||||||| || ||||| | || ||
Sbjct 2170193 CATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 2170146
Score = 104 bits (114), Expect = 2e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || | || ||||| || || || ||||| || || | |
Sbjct 2170144 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACCATCACCCTCGAGGTTGAGTCTTCT 2170085
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | || |||||||||||| ||||| || || || || ||
Sbjct 2170084 GACACTATCGACAACGTTAAGTCTAA-GATCCAAGACAAGGAAGGTATTCCACCTGACCA 2170026
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| ||||| ||||| || || || || |||| || |||| | || || || ||
Sbjct 2170025 ACAGCGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTCTCTGACTACAA 2169966
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||||||||| ||||| || || |||||||| || ||||
Sbjct 2169965 CATTCAAAAAGAATCCACTCTTCACTTGGTTTTAAGATT 2169927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897526891640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |