Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2 118 7e-22 seq4 93.3 3e-14 >seq2 Length=2390349 Score = 118 bits (130), Expect = 7e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||| ||||| || |||||| |||||||| |||||||| || || Sbjct 2170373 ACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGA 2170432 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| |||||||| || || || |||||||| | || || || | || Sbjct 2170433 AAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGG 2170492 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || | | || | ||| | |||||| || || | Sbjct 2170493 AATACCTTCCTTGTCTTGGATCTT-GGACTTGACGTTGTCAATGGTGTCAGAGGACTCGA 2170551 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 | |||| ||||| || ||||||||||| || || || ||||| ||||| || Sbjct 2170552 CTTCAAGAGTGATAGTCTTACCTGTTAATGTCTTAACGAAGATTTGCATTGT 2170603 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||| ||||| || |||||| || ||||| |||||||| || || Sbjct 2170145 ACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 2170204 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| |||||||| || || || |||||||| | || || || | || Sbjct 2170205 AAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGG 2170264 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || | | ||| | ||| | |||||| || || | Sbjct 2170265 AATACCTTCCTTGTCTTGGATCTT-GGACTTAACGTTGTCGATAGTGTCGGAAGACTCGA 2170323 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || ||||| || || || || || || || |||||| Sbjct 2170324 CTTCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 2170373 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | || ||||| || |||||| || ||||| |||||||| || || Sbjct 2169392 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 2169451 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | || |||||||| || || || || ||||| | || || || | || Sbjct 2169452 AAGAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGG 2169511 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || | | ||| | ||| | ||||| || || | Sbjct 2169512 AATACCTTCCTTGTCTTGGATCTT-GGACTTAACGTTGTCGATAGTGTCAGAGGACTCAA 2169570 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || ||||| || || || || || || || |||||| Sbjct 2169571 CTTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 2169620 >seq4 Length=2182181 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | ||| ||||| || | ||| ||| || || |||||||| || | Sbjct 2128778 CACCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAG 2128837 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || || | |||| ||||| || || || || || ||||| | || || || | | Sbjct 2128838 AAAGGGTTCTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTG 2128897 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||| ||||| || || | | |||| ||| | ||||||| || || Sbjct 2128898 GAATACCTTCCTTGTCCTGGATCTT-GGACTTGACATTGTCAATGGTGTCGGAGGACTCG 2128956 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || ||||||||||| || || || || || ||||| Sbjct 2128957 ACTTCCAAGGTAATGGTCTTACCTGTTAAAGTCTTGACGAAAATTTGCAT 2129006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703947920960